Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03797 ATGGAGTTCAACCGCCCCGGAGCCGTCGAAAGTGACAGATGGTGGGGCGGAGGGAGAAGATCCTATGGCGGTGGTGGATTCGACGGTGAACGCAGAATGACACCTCCTTCTTCTAGGGTCGGGTCGAGGGCTGACGGGGTGGATAACTGGGCACTCGGCAAGAAGCCTTCCTTTCCTGCAAGATCTTCAACATTTGGTTCCGGCTTTCGTGATTCGGGTTCGGATCGTTGGACCTTGAGAGATGTGGAGCGACCCAGATTGGTATTGGATCCTCCGAGAGGTGAGAGCTCTGTGAATGGAACAGTGGCAAAGCCGAATCCGTTTGGGTCGGCGAGGCCAAGGGAAGAGGTTTTGGCTGAGAAGGGATTGGATTGGAAGAAGCTTGAGTTGGTAATTGAAGCCAAGAGTGCAAATTCAAGCACTATGAGACCAAAGGTGAATCCTTTTGGGGATGCTAAGCCTAGAGAGGTTTTGCTTGAGGAACGAGGTCAAGATTGGAGAAAGATTGATCATGAATTGGAGCATCGACGTGTTGACAGGCCAGAAACAGTGGAGGAAAAAATATTGAAAGAAGAAATTGATAACTTGAAGAAGGAACTAGAGAAAGAGTCCACAATAAATTCAAATAAGGAATCTATTGATGGGACTGGTGGAGACCAAATCAGTACACGTGCAATGTTACTCCAGAAACAAAGGGAACTGGAAGTTCTTATCCGTGATTTGGATGACAAAGTTCGTTTTGGGCAAAAAGCAATTGAAAGGCCAGGCTTTGCAGCAGGAAAGACTACTGGTTTCCCTGATAGGTCACCTTCTCGTTCTGGCTCATTTGAGAATTCTAGAAGTGTGGAGTTTGCAAACAGACGTCGATCCCGTGGCACTGGAGATGTGTGGATGTGTCCTAGTGACGACAAAAGACCATTCATGGTAGCAGGGATAGAGAAGTTTTCTGAGCAGTAG 957 0.4796 MEFNRPGAVESDRWWGGGRRSYGGGGFDGERRMTPPSSRVGSRADGVDNWALGKKPSFPARSSTFGSGFRDSGSDRWTLRDVERPRLVLDPPRGESSVNGTVAKPNPFGSARPREEVLAEKGLDWKKLELVIEAKSANSSTMRPKVNPFGDAKPREVLLEERGQDWRKIDHELEHRRVDRPETVEEKILKEEIDNLKKELEKESTINSNKESIDGTGGDQISTRAMLLQKQRELEVLIRDLDDKVRFGQKAIERPGFAAGKTTGFPDRSPSRSGSFENSRSVEFANRRRSRGTGDVWMCPSDDKRPFMVAGIEKFSEQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03797 318 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 33 141 IPR010433 GO:0003743
Rops11g03797 318 MobiDBLite consensus disorder prediction 266 281 - -
Rops11g03797 318 Coils Coil 186 206 - -
Rops11g03797 318 MobiDBLite consensus disorder prediction 257 300 - -
Rops11g03797 318 Pfam Plant specific eukaryotic initiation factor 4B 41 140 IPR010433 GO:0003743
Rops11g03797 318 Pfam Plant specific eukaryotic initiation factor 4B 141 307 IPR010433 GO:0003743
Rops11g03797 318 MobiDBLite consensus disorder prediction 137 156 - -
Rops11g03797 318 MobiDBLite consensus disorder prediction 88 114 - -
Rops11g03797 318 MobiDBLite consensus disorder prediction 1 76 - -
Rops11g03797 318 MobiDBLite consensus disorder prediction 201 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03797 Rops-Chr11 71610600 71613531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03797 42 305 Eukaryotic Initiation Factors Gene Family AT3G26400 51.163 2.02e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03797 - - gmx:100784238 372.089