Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03791 ATGGACAGTGTTGTGGTGAATGAAGATGATCCTGAATTTGTTCTTCTGTCACTGCAGGACGGCGAGATCGGCCATTCTATTTCTAGTCAGAGTCAGAGAAACACAAAGACAGAGACAGGGTCAAGTGTTTTAGATATGTCAGGGGAAGAAGGGAAGGAGAAGAAGCCCTCTGGGGGTGGTGTTGCTAGGAGAACCTATTCTCGTTCAGTTTCATGGACTGATAGGTCTCCAAATAGCAATAAACCACCAGCAAATAGCAAACCACGATCATTGTTGCCACCTCTTCAGCCTCTTTCAATCAACAAGCGTAGCATGGAGGAATGGCCTAGTGCAGGATCTGATGATCTTGGAGTTTGGCCTCTTCCTCAAACACCAAGAGGGTCCATCAGAGCCTATGAACCCACCAAGGATTTTCAGTTCAAAAGGGACAAGTTGGCCTTTTATGATAAGGAGTGTTCCAGAATTGCTGAGCATATATACTTGGGGAGTGACACAGTGGCCAAGAATCATGAACTCCTAAGGCAAAATGGAATAACACATGTGCTCAACTGTGTTGGGTTCGTTTGTCCAGAGTATTTCAGAAGCGATTTTGTGTACAAGACACTGTGGTTACAGGATAGCCCCACTGAGGACATCACTAGTATTCTATATGATGTGTTTGATTACTTTGAAGATGTTAGAGAGCAAGGTGGGCGTGTCCTTGTCCATTGCTGTCAGGGTGTTTCTCGATCAACAGCTCTGGTAATTGCGTACCTCATGTGGAGGGAGGGACGAAGCTTTGAAGATGCGTTTCAATTTGTGAAGACTGCAAGGGCAGTGACCAACCCCAACATGGGTTTTGCTTGTCAACTTTTACAGTGTCAGAAACGGGTACTTGCTATGCCTGCAAGTCCAAATTCTATTCTTAGGATGTACCGGATGGCTCCTCACTCACCCTATGATCCTCTTCATCTAGTACCTAAAATGGTAGACCAGCCGGGTGCACAGGCACTTGATTCTCGTGGGGCTTTCATTATCCATATTCCTTGTGCTATTTATGTTTGGAATGGAAAACATTGTAACTCGGTGATGTCTTGCAATGCAAGGAGTGCAGCTTGTCAAGTTATCCGTTATGAGCAGGCTAAGGGTCCAGTTCGGAGCATCCACGAAGATGAAGAACCACCCGAGTTTTGGGTTGCTCTTGCTGATGAGCAGCACTTAGCAGGTAATTCTGGCAAACAAGGGGCCGTGGAGGAGCCAGTCTTGCCTTCTGAAAGCATGGAGGTTTCAGATGCAGCTAATATGGGGATTGGTCCAAGAAAAGTTGATGCATATGATTTGGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTTCTGTATCTAATGCTGAATCAGAAACTTGCCTTCCTGCTAGAGTACTTGGTTGGGGAAGACTGAGGCGGAAGTTTTCTAGTGGTGTCATGAAAGAATTGTTCAATTCCCCAAAATGGAACTGTGATGCAATCTCATGCAATGATCAAGCCAGTGTAACTGTGGAAGATGAAAACCAAGATTCTGTGACTGATCCTTTATCACCATCATCAAATGATCCCTGTGGTTCACCAGATTCCTTTGAATGTTTTCCAAATAAAAGCTTAGGCAGGGAAAAAGATAATGTTGAAGCTACGGAATCATCTGTTCCTGGTGTTGCTTCATTACTGCCACTATCTCCTCCTGGCACATCAAATCCTTTTCCTTGTTTTCTAAGCAGCAGCCCAAAATTCAATTCCAAGTCGCCAACACTTTCACCTTCAAGTTCTGATTATGCAAGTTCATTTACATTTTCACCTTCCTCTACCAATTGGTCGGACTTGTCATTTGTGTCATCTCAGCTGCCATCACCATCTGGCTTGGAATCAACTGAACCCTTTTATTTTAAAGATGTATCTTTCTCAGGAGGTTCCTCTTTACCTCACAAAGATGTTGTCTCTTCACCTTCAGAGTCATTTTCAGCTAATCACACCTTGGGAGGGGCAAACTCCAATTCACCACTGAAAGGACCTTCTCTCTCCATTGCAGAGCGCAGAGGGAGTAATCCACCGCCTCGGATGTTGCTATCCTCTGTTAATGAATCCTCTCATGTCCACAAGAACCTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTATGCAAACAATCTGATCTTGAAAACAATGGAAAAGGGCTAATATCAGATGATGATATCATTAGTTCAGGTGTTGAAGCAGATAGTGAGATTAATGACGACAAAGAGGATCATGATACCATGTTATGTAATATGATTGCTCTGCTTGAAGTAGAGGAGAAGTTAATGGAATGA 2337 0.439 MDSVVVNEDDPEFVLLSLQDGEIGHSISSQSQRNTKTETGSSVLDMSGEEGKEKKPSGGGVARRTYSRSVSWTDRSPNSNKPPANSKPRSLLPPLQPLSINKRSMEEWPSAGSDDLGVWPLPQTPRGSIRAYEPTKDFQFKRDKLAFYDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFRSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWREGRSFEDAFQFVKTARAVTNPNMGFACQLLQCQKRVLAMPASPNSILRMYRMAPHSPYDPLHLVPKMVDQPGAQALDSRGAFIIHIPCAIYVWNGKHCNSVMSCNARSAACQVIRYEQAKGPVRSIHEDEEPPEFWVALADEQHLAGNSGKQGAVEEPVLPSESMEVSDAANMGIGPRKVDAYDLDFEIFHKALAGGVVPPFSVSNAESETCLPARVLGWGRLRRKFSSGVMKELFNSPKWNCDAISCNDQASVTVEDENQDSVTDPLSPSSNDPCGSPDSFECFPNKSLGREKDNVEATESSVPGVASLLPLSPPGTSNPFPCFLSSSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSQLPSPSGLESTEPFYFKDVSFSGGSSLPHKDVVSSPSESFSANHTLGGANSNSPLKGPSLSIAERRGSNPPPRMLLSSVNESSHVHKNLVRSQSFSLPDLCKQSDLENNGKGLISDDDIISSGVEADSEINDDKEDHDTMLCNMIALLEVEEKLME* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03791 778 ProSiteProfiles Dual specificity protein phosphatase domain profile. 151 293 IPR020422 GO:0006470|GO:0008138
Rops11g03791 778 MobiDBLite consensus disorder prediction 24 96 - -
Rops11g03791 778 MobiDBLite consensus disorder prediction 510 535 - -
Rops11g03791 778 SUPERFAMILY Actin depolymerizing proteins 297 397 - -
Rops11g03791 778 MobiDBLite consensus disorder prediction 510 533 - -
Rops11g03791 778 CDD DSP 152 286 - -
Rops11g03791 778 Gene3D Protein tyrosine phosphatase superfamily 131 292 IPR029021 -
Rops11g03791 778 MobiDBLite consensus disorder prediction 24 44 - -
Rops11g03791 778 PANTHER MKPA PROTEIN 46 731 - -
Rops11g03791 778 MobiDBLite consensus disorder prediction 649 694 - -
Rops11g03791 778 ProSitePatterns Tyrosine specific protein phosphatases active site. 235 245 IPR016130 GO:0016311|GO:0016791
Rops11g03791 778 Pfam Dual specificity phosphatase, catalytic domain 159 289 IPR000340 GO:0008138|GO:0016311
Rops11g03791 778 MobiDBLite consensus disorder prediction 64 86 - -
Rops11g03791 778 Gene3D Severin 303 401 IPR029006 -
Rops11g03791 778 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 210 271 IPR000387 GO:0016311|GO:0016791
Rops11g03791 778 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 141 293 IPR029021 -
Rops11g03791 778 MobiDBLite consensus disorder prediction 649 680 - -
Rops11g03791 778 SMART dsp_5 151 290 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03791 Rops-Chr11 71561072 71563701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03791 76 187 Protein tyrosine phosphatase (PTP) family AT3G55270 48.800 2.47e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03791 - - lja:Lj6g3v0574850.1 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00978 2 13725264 13727951 Rops11g03791 11 71561072 71563701 PCT