Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03774 ATGGCAGCTTTGTTACCTTGCGCGCCGAATATAGTTTCTGCTCCGTTTGGGAACAGAAGCAGGAGCAATCTCCCGCAAAGACCGCACTCCTACGGTTTCTCCGGTTCGACCCGGAATTTTCTTCGCGGTTCGCTTTCCGTTGTTCGGTTCGGATTTAAACCCGGTTTTATTCCCGAGCCGGATGGCGCTGAAGGCTTCATCGTGGAACTGTTTAACCGAGCGGAGGGTTTTCTTTACACGATTGCCGATGCAGCCGTTTCTGCTTCTGACTCGGCGGCCACCGCCACTACCACCGCCAAACAAAATAATGATTGGTTTTCTGGAATCACAAATTACATGGAGACTGTTCTCAAGGTACTCAAGGACGGGCTTTCTACTTTGCATGTGCCATATGCTTATGGTTTTGCAATTATACTTCTCACGGTTATTGTAAAAGCTGCCACATTCCCATTGACAAAGAAACAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAACAACGGTATGCTGGTGATCAGGAGAGAATTCAACTGGAAACTGCTCGGTTGTATAAATTGGCCAACATTAATCCTTTAGCAGGATGCCTGCCTACACTTGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTAATGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCGACTACAATTGCAGCTAAGCAAAATGGCAGTGGAATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCGGATACATTGGCTTACCTTGTCTTGCCTGTATTGCTGGTTGTTGCTCAGTACATCTCTGTCGAAATAATGCAGTCATCACAGGCTAATGATCCCAACATGAAGAGTTCTCAAGCATTAACCAAGATCCTTCCTTTAATGATTGGTTACTTTGCTCTCTCGGTTCCTTCTGGTCTTAGCATTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTGTGATGCAAGTTCCAGATGATATCATGAAGGATGACCTAAAGCAGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTGGAAGAAACCAGACAAAGCGAGAAATCAACATCAGAGGGGCCACAACCTGGTGATAGATTTAGGCAAGTAATGGAGCAAGAGGCAAGGAGAAGACAGCAGAGAGAAGAAGAAAAAAGGAAAGCTGAGGAAGCAGCAGCTAAAGCAACACACGAGAAAACAATTGAAGGGGAAAATCAAGCTGGAGGTGATTTAGTTGTTGAAAAATCTCAGTCTGTGGCTGCTGATTCTGATCCATCTGTATCTGGAGTTGTAAATGGTATTCCATTAAGCAAAGACTTGGAGGGGGATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTGCTCATTTCAATGCTGTTGAAATAAACAAGAAAAGTCTAGACAAGGAGCCAAGAGAAGTATTAACAACTGCAGCTACCACAAACAAGCAACCCCCTGGAGAAGACCCAGATCACGTGACAAAGGATTGA 1608 0.4428 MAALLPCAPNIVSAPFGNRSRSNLPQRPHSYGFSGSTRNFLRGSLSVVRFGFKPGFIPEPDGAEGFIVELFNRAEGFLYTIADAAVSASDSAATATTTAKQNNDWFSGITNYMETVLKVLKDGLSTLHVPYAYGFAIILLTVIVKAATFPLTKKQVESAMAMRSLQPQVKAIQQRYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLNEGFFWIPSLAGPTTIAAKQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVAQYISVEIMQSSQANDPNMKSSQALTKILPLMIGYFALSVPSGLSIYWLTNNILSTAQQVWLQKLGGAKNPVMQVPDDIMKDDLKQIQKSVSKLNSTKVEETRQSEKSTSEGPQPGDRFRQVMEQEARRRQQREEEKRKAEEAAAKATHEKTIEGENQAGGDLVVEKSQSVAADSDPSVSGVVNGIPLSKDLEGDQNSTSTSETENNEGSAHFNAVEINKKSLDKEPREVLTTAATTNKQPPGEDPDHVTKD* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03774 535 MobiDBLite consensus disorder prediction 374 535 - -
Rops11g03774 535 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Rops11g03774 535 MobiDBLite consensus disorder prediction 474 496 - -
Rops11g03774 535 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Rops11g03774 535 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Rops11g03774 535 MobiDBLite consensus disorder prediction 404 439 - -
Rops11g03774 535 Coils Coil 405 433 - -
Rops11g03774 535 PANTHER OXA1 82 423 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03774 Rops-Chr11 71417098 71423962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03774 36 420 Chloroplast and Mitochondria Gene Families AT2G28800 54.381 3.12e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03774 K03217 - gmx:100802546 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03774 11 71417098 71423962 Rops11g03774 11 71417098 71423962 ECH