Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03757 ATGGTGTATAACCCCATGATTCTCTTTTACTCTTGTGATGGCACCACACAATTCAACACAACCACCATATCCAACCAGCTGAAGAAATCGTTGTCAGATGTTCTAACCCATTTCTACCCTCTCGCAGGTCGAATGAAAGACAAGAGTTTCATAGTTTGCAACGACGAGGGCATCCCCTATTTAGAAACAAAAGTGAAGTGCAAACTTGTGGAGGTTCTTAACAAGCCAGTTCCAGGAGAACTCAATCATTTGGTTCCATTTCAACTTGATGATTTCACTGATATCATATTTGGTGTTCAAGTTAATGTCTTTGATTGTGGTGGTATTGCAATTGGTGTTTGCCTCTCTCACCAAATAGCAGATGGTTCATCAGTTTTTACTTTCCTCAATCATTGGGCAGCCATTGCTAGTGGACAAGGTGTGTTGCCAAAACCAGAGTTTGTTTCAGATAAGCTCTTTCCACCCAAAAATATATCTGGGTTTGACCCTAAAATTGGCATCATGAAGGAGAACATAATCTGCAAGATTTTTGTTTTTGATGCTTCAGTTATTGAAAATCTTAGGGCAAGATATGCAAATACACCAGGCTTTGAAAACGAGAAGCTCCCTAGCCGAGTAGGGGTTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTATGATTAAAGAAGAATCTGGTCGTCCACAAAGAAAATATGGTGTGGTTCATGCAGTGAACCTGCGTCCAAAGATGGAACCACCACTGCCTCTAGATTCATTTGGAAACTACTCACGATTCACAATGACAATTCCAACGCTGAAAAATGGAGAAGAGTGTTATGGGCTAGCGAAGCAGGTGAGTGATCAGATAAACAAGGTTGACAATGATTTTGTGAGAAAGTTGCAAGAGGGCAATGAGCATTTGGATTTCCTTAAGAATTTTTTACATAGAGTGCTTGTGATGAAGGAGGAGTTGGACTTGTTTAATTTCACTAGTTTGTGTAGGTTTCCTCTGTATGAAGCTGATTTTGGTTGGGGAAAACCAACGTGGGTAGGTTCACCTGCTTTGACTTTTAAAAATCTGGTTGTGTTTTTTGATGCTAAGATTGGTGGTGGCATAGAGGCCTATGTTAACTTGAAGGAGGAGGACATGAAAAAGTTTGAAGCAGATGAGGAGTTGCTTGCCTGTGTGAATAAAGCACGAACTTGTTGA 1191 0.4047 MVYNPMILFYSCDGTTQFNTTTISNQLKKSLSDVLTHFYPLAGRMKDKSFIVCNDEGIPYLETKVKCKLVEVLNKPVPGELNHLVPFQLDDFTDIIFGVQVNVFDCGGIAIGVCLSHQIADGSSVFTFLNHWAAIASGQGVLPKPEFVSDKLFPPKNISGFDPKIGIMKENIICKIFVFDASVIENLRARYANTPGFENEKLPSRVGVLSAFIWSRYVAMIKEESGRPQRKYGVVHAVNLRPKMEPPLPLDSFGNYSRFTMTIPTLKNGEECYGLAKQVSDQINKVDNDFVRKLQEGNEHLDFLKNFLHRVLVMKEELDLFNFTSLCRFPLYEADFGWGKPTWVGSPALTFKNLVVFFDAKIGGGIEAYVNLKEEDMKKFEADEELLACVNKARTC* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03757 396 PANTHER F21J9.9 2 389 - -
Rops11g03757 396 Gene3D - 1 160 IPR023213 -
Rops11g03757 396 Pfam Transferase family 4 386 - -
Rops11g03757 396 Gene3D - 169 390 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03757 Rops-Chr11 71287648 71289138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03757 3 381 Monolignol Biosynthesis Gene Families AT5G48930 25.666 6.80e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03757 K13065 - gmx:102670206 571.237