Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03746 ATGAAGGAGGAAATCAAGTCAGAATTCAATAAAAGTGGATTCGATCTTGATGATGAAGAAGAAATACTGAACAAATGTGTCACTTTCTGCATCAACTACAGTCTCAGCCCTTCCGATCTCGTTTCAAGTTGGGAGGTTTATTACCTGAACAGACAGCTGAATGAACCAACAGTACAAAATGTTGAGATGGATGGCTTTATGTTGCATCTACAAAATAATAAGAAAGAAGATGTGATAGAGGAAGCTGGTTTGCATAGTTACTCTATCAAAGATGTAGAAATGATCTTAAATGATGATGATGATACAAAGGACAATACTCCCAGAACTCCAATGAATCACCATCAAGATCCTTATTCACCTGCACGTGATACAACATCTTTAATTTATGGGAATGTTTTATCTTCTGGAAAACCATCAAACCTAGTGACACCCTTTTCAAAGCGAACAGATAGGCTTGCGGTGAAATTTAGCTTCAACACCATACCTGATATAGAGAATGGAGAACAAGAACCTAATCATGAGAATGATGAGGACAATGTTGTCAGGAAAGTTATACCCCGTAAAAGGTGTTCATTGGTGGTTCATGGATCGGGGCCCAAACCAGGTTGCAGATTCATGTGTGACAGGACTGAGGATAGGATTAATGCAATAGATAACCGCATTAGGAAACATACAAGGGCACTCATAGCTTCTGGGCTCTATGAAGAACCTACAGACCCTACAGTTGCTTCACAGAGAAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTCTAAATGAGAAGTCTGTCATGCTGCAGGGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTAGACTTGCAACGTTTGAGCCATTTTTCAGTTTTTCCTGGCCAGGTAGTTGGTATTGGAGGGCATAATCCTAGTGGTCATTGCTTAGTTGCTTCTAAATTGGTGGATTCTGTACCTACATCTGTTGCTGATGAGGATTTGAATCCTCCAAAGAAGCAAGCTATTGATAAGGAGAATCAGCCAACTGATCTGCCTTGTAAACAAAGAGAGTTATCAATGATTATTGCAGCGGGGCCTTTTACTACAACAGACAATTTGTTGTTTGAGCCTCTTGCAGAACTTTTGGCATATGCAAAGCGAAAACCGCCACAGTTGCTTGTATTGCTGGGACCATTTATTGACTCTGAACACCCAGACATTAAGAGAGGAACAACGGACATGAGTTTTGATGAAATATTTCGTTTTGAAGTCCTGAGGAAGTTGGAAGATTATGTAGAATGCATGGGTTCAGCAGTGCGTGTTCTTCTTGTACCATCCATACGGGATGCTAATCACGATTTTGTTTTTCCTCAGCCTGCATTGGATATCAGTCTACCTGATCTCAAGTCTCAGATAGCCAGTCTCACTAATCCTGGAATCTTTGAGGCAAATGAGGTCAAATTTGGTTGCTGCACTGTGGATATTCTCAAGCAAATCAGTGGGGAGGAGATATCACGAAGTGCAGCAGATGGAAAACCTATTGATCGCCTGAGTAGACTCGCAAACCATGTTCTTAACCAACAAAGCTTCTATCCACTTTATCCACCGGCAGAAAATGTCCCCTTGGACTTTACTCTTGCCCCAGAAGCCCTTCAGCTCTCATTGATTCCAGATGTTCTTATCTTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAATAGTGAAAGTGAAGGGATAAACAACATGAAATGCATTGCCGTCAATCCGGGAAGACTAGCCAAGGGAGAAGGAGGGGGTACTTTTGTTGAGCTTGATTATGGTGGGGGTCCTGACAAAATTAACGCTTCAATTGTTGGCATATGA 1851 0.4171 MKEEIKSEFNKSGFDLDDEEEILNKCVTFCINYSLSPSDLVSSWEVYYLNRQLNEPTVQNVEMDGFMLHLQNNKKEDVIEEAGLHSYSIKDVEMILNDDDDTKDNTPRTPMNHHQDPYSPARDTTSLIYGNVLSSGKPSNLVTPFSKRTDRLAVKFSFNTIPDIENGEQEPNHENDEDNVVRKVIPRKRCSLVVHGSGPKPGCRFMCDRTEDRINAIDNRIRKHTRALIASGLYEEPTDPTVASQRSIFAVGMICCDGEGRLNEKSVMLQGSIEHSGGECVRLDLQRLSHFSVFPGQVVGIGGHNPSGHCLVASKLVDSVPTSVADEDLNPPKKQAIDKENQPTDLPCKQRELSMIIAAGPFTTTDNLLFEPLAELLAYAKRKPPQLLVLLGPFIDSEHPDIKRGTTDMSFDEIFRFEVLRKLEDYVECMGSAVRVLLVPSIRDANHDFVFPQPALDISLPDLKSQIASLTNPGIFEANEVKFGCCTVDILKQISGEEISRSAADGKPIDRLSRLANHVLNQQSFYPLYPPAENVPLDFTLAPEALQLSLIPDVLILPSDIKYFVKVLNSESEGINNMKCIAVNPGRLAKGEGGGTFVELDYGGGPDKINASIVGI* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03746 616 Gene3D - 506 612 - -
Rops11g03746 616 Gene3D - 335 499 - -
Rops11g03746 616 FunFam DNA polymerase alpha subunit B 1 76 - -
Rops11g03746 616 Gene3D - 1 74 IPR043034 -
Rops11g03746 616 FunFam DNA polymerase alpha subunit B 336 501 - -
Rops11g03746 616 PIRSF DNA_pol_alpha_2 1 604 IPR016722 -
Rops11g03746 616 MobiDBLite consensus disorder prediction 98 124 - -
Rops11g03746 616 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 602 IPR016722 -
Rops11g03746 616 Coils Coil 207 227 - -
Rops11g03746 616 Pfam DNA polymerase alpha/epsilon subunit B 356 566 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03746 3 616 Core DNA Replication Machinery Family AT1G67630 61.022 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03746 K02321 - gmx:100795306 1003.05