Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03738 ATGGCGGCTGGTGGACATGGAGGTTATCGCGACAACGAGTTTAGGGATCGTGAGTCCAATTTCGATGTCTCAAGGCACGTTTTTAATAATAATTCGAAAGAAGAGTATGATAGGATTAGGAATGGTAACCGTGATTTTGTGAGGGATGGGAGCAAGGATGTAAGAGATAGGGTTAGCTTGAGACAGAAAGATATTAGGGAGAGAGAAGCTTCGAATGGCAGTTATCGGTCATCTTCGAGTAGGAGTGACTCCGGTAGCAGTGGTGGTGGCCGAAGTGCTGGGCTTGGTCCCAGAAGATGTGGCTTTTCTGTTAAGACTATGGATAGAGAACCAGGTGAGCTTTCTAGCGAGAGTGGGTCTGATGATGGTATTGAATCAGAATCATTGGTGAAATACCATGAGGTTGTGACGGGCAAAGAGAATGGGACTAGGAAAAGAAAATTTTCACCGATAGTGTGGGATCAGGATGACAAAGAAGTGACTGCTCTTCCCCCTCCACATCCACTTCCAAGAGCATTCCGTCAGTCACCTAATGTTCCTAACAATGGGTTTGAAATTCATCCTGTTGAAAACAGTGAAGCTGAGATTCTTCAGTTACCAACTGCGACTAGTCCTTTGCTGTCTGAGTCAGTTCAGGATACTGAATCTGAGTCTCCTGTAGGTTTGCATTCATTGTTGCGTGAGCAGAGACGGGGTAGTGAGCAGGAAGTTGAGCAGCCAGAAGGTGAAGAAGATTATGTTCCAACTCATAATATATCTTCCTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGGTGAAGGTAAAACCTACAATGACAAGGAAATCCTTAAAAGGAGGAGGGAGCTATCTCCTGAGCTGGGTATGAGAGTGAGAAACAAGCTGTTGAGACTGGAGGAATCTAAAATAGAAGGTTTTGAAAGAACGAGGGCCAGATCATCTGAATCTGAAGAAAGAGGTAGCCGTGGGAGATCGTCCAGTGGAGATGATCATCCTGGTATTGAGTCAGAGAAGGATGACTATATGGAGATTGATGGTCAAGGTTGCAAAAGTGAAACTAGTGGTCATCACTCAGATACAGATTCTGAAAATGAAGATGATAGCAGGGAAACTCCAGAACCTCTGGCTCCACCACACAGAGTTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGATAAGAAGACTGGTGAAATTGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCTCTGACTTCTCTTAGGGAAATAAACATACTTCTTTCCTTTCACCACCCATCCATAGTTGACGTTAAGGAAGTAGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTTATGGAATATATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTCTTAATAATAGGGGCGAGTTAAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTCTGGGGACAAAACAGTATTCGACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAGCTGTTGTCCAAGGAACCACTATTTAATGGGAGGACTGAATTTGATCAACTTGACAAGATTTTCAGAATTCTTGGCACACCTAATGAATCAATTTGGCCTGGGTTCTCAGAATTACCTCGAGTCAAGGTCAATTTTGTAAAGCATCAGCTTCCAACTCTGGGTGGTTCTGGTCTGGCTATCTGGCCTCCCTTGGTGACTTACTTTGACACAACCTTTCTAGTGTGTATTAACCTCCAGAATGTTCCTTTCAGGTATAATCTCCTGCGTAAAAAGTTTCCTGCTACATCATTCACTGGATCTCCAGTTCTTTCTGATGCTGGATTTGATTTGTTGAACAAGCTTCTCACTTATGACCCTGAAAAGCGGATCACGGCTGAAGGTGCTCTCAACCATGAGTGGTTTCGTGAAGTTCCCCTTCCCAAGTCTAAAGAATTCATGCCCACATTCCCTGCTCAACATGCTCGAGACAGGCGGATGCGGAGAATATTGAAGAGTCCACATCCATTAGAGGAGCAGCGCCGGAAGGAGTGGCAGCAGGGTGAAACAGGGACTAGTGGTATTTTTGGTTAA 2328 0.4399 MAAGGHGGYRDNEFRDRESNFDVSRHVFNNNSKEEYDRIRNGNRDFVRDGSKDVRDRVSLRQKDIREREASNGSYRSSSSRSDSGSSGGGRSAGLGPRRCGFSVKTMDREPGELSSESGSDDGIESESLVKYHEVVTGKENGTRKRKFSPIVWDQDDKEVTALPPPHPLPRAFRQSPNVPNNGFEIHPVENSEAEILQLPTATSPLLSESVQDTESESPVGLHSLLREQRRGSEQEVEQPEGEEDYVPTHNISSSRWAAGDNSPGGEGKTYNDKEILKRRRELSPELGMRVRNKLLRLEESKIEGFERTRARSSESEERGSRGRSSSGDDHPGIESEKDDYMEIDGQGCKSETSGHHSDTDSENEDDSRETPEPLAPPHRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLDKIFRILGTPNESIWPGFSELPRVKVNFVKHQLPTLGGSGLAIWPPLVTYFDTTFLVCINLQNVPFRYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEGALNHEWFREVPLPKSKEFMPTFPAQHARDRRMRRILKSPHPLEEQRRKEWQQGETGTSGIFG* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03738 775 MobiDBLite consensus disorder prediction 201 219 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 751 775 - -
Rops11g03738 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Rops11g03738 775 SMART serkin_6 394 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03738 775 ProSiteProfiles Protein kinase domain profile. 394 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03738 775 SUPERFAMILY Protein kinase-like (PK-like) 386 726 IPR011009 -
Rops11g03738 775 MobiDBLite consensus disorder prediction 72 89 - -
Rops11g03738 775 Gene3D Phosphorylase Kinase; domain 1 379 476 - -
Rops11g03738 775 CDD STKc_CDC2L1 388 720 IPR045267 GO:0004674|GO:0005524|GO:0006468
Rops11g03738 775 MobiDBLite consensus disorder prediction 9 71 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 1 127 - -
Rops11g03738 775 Pfam Protein kinase domain 394 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03738 775 PANTHER CELL DIVISION PROTEIN KINASE 392 726 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 158 186 - -
Rops11g03738 775 Gene3D Transferase(Phosphotransferase) domain 1 477 751 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 305 379 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 305 374 - -
Rops11g03738 775 FunFam cyclin-dependent kinase G-2 isoform X1 379 476 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 271 291 - -
Rops11g03738 775 MobiDBLite consensus disorder prediction 201 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03738 Rops-Chr11 71094100 71097643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03738 390 724 Core Cell Cycle Gene Families AT1G20930 42.274 2.48e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Rops11g03738 Pkinase 2.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03738 K08818 - gmx:100793729 1102.04