Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03715 ATGATTCTAACACTTGTTGATTTTAGCACAACCTTCGAAAACACCATCTCTTTTTGTTCTTGGTCACTTGTTACTCTCTTTCTGTCCACTTCCCTTGCCCTCCTAGCTGTCTTCCTTAACTGCTGGTTGGTCCCTGGAGGTTTTGCATGGAGGAATTATCACAACCTTTACAAAGAAAGCCCAAAACTCTCCGGTCCTATGGGCTGGCCCATTTTGGGAACTTTGCCTGAAATGGGTTCTCTGGCCCATAGAAAACTCGCTAGCATGGCCACTTCCCTGAACTCAAAAAGGCTCATGTGTCTGAGTCTTGGAACCAACCGTGTTGTCATTAGTAGCCACCCTGAGACTGCGAGAGAAATTCTATGTGGGACATCTTTCTCGGATCGTCCTGTTAAAGAATCAGCTCGCTTGCTTATGTTCGAACGTGCCATTGGTTTTGCTCCATATGGAACCTATTGGCGCCATCTTCGAAGGGTGGCAACTACTCACATGTTCTCTCCTAGGAAGATTTCTGGTTTGGAGAGCCTAAGGCAACATGTGGCTAGTGAAATGGTGAAGAGAACGTGTAAGGAAATGGAGGAAAATGGGGTTGTTGAGGTGAGAGGTATATTGCATGAAGGGTCTCTAAGTAATATTTTGGAGAATGTGTTTGGTACCGATGATAGTTCTCTAAGCTCACAAACCAAGGAGCTGTTAGGTAATATGGTTAATGAAGGGTATGACTTGATTGCAAAGTTTAATTGGGCAGATTATTTTCCTTTTAAATTTTTGGACTTTCATGGGGTCAAAAGAAAGTGTCACAAATTGGCGGCTAAGGTCAACACTATGGTGGGTCAAATTGTGGAAGAAAGAAAAAGATCTGGAAAGTTCGTTGGACAGAATGATTTTCTTAGCTCTTTGTTATCGTTACCCAAAGAAGAGAAGTTAGGTGATTCAGATGTAGTGGCTATTTTGTGGGAAATGATATTTCGGGGAACAGACACAGTTGCTATACTCCTTGAATGGATTATGGCCATGATGGTGTTACACCAAGACGTACAAACAAAAGCCCGCCAAGAAATTGACACGTGTGTCGGCCCAAACGGTCACGTGCGAGACTCAGACATTCAAAACCTTCCTTACCTCCAAGCCATAGTGAAGGAGGTTCTGCGGTTGCACCCACCGGGCCCATTGCTTTCATGGGCTCGTCTTGCAATCCATGATGTCCACGTGGACAAGGTAACCGTGCCAGCTGGTACGACAGCAATGGTTAACATGTGGGCCATAACACATGACTCGTCTGTATGGGAGGACCCATGGGCCTTTAAGCCTGAAAGGTTCATGAAGGAAGATGTGTCTATCATGGGTTCGGACTTGAGACTCGCACCATTTGGTGCGGGAAAAAGGGTGTGTCCGGGAAAAGCATTGGGCTTAGCCACGGTTCATCTCTGGCTTGCACAGCTTCTGCACCATTTCATATGGGTTCCAGTGCAGCCTGTGGATCTTTCTGAATGCCTCAAGCTCTCCCTTGAAATGAAAAAACCTCTACGTTGCCAAGCGATTTGCAGGGATAACATTGTAAGCTCTTAA 1569 0.4544 MILTLVDFSTTFENTISFCSWSLVTLFLSTSLALLAVFLNCWLVPGGFAWRNYHNLYKESPKLSGPMGWPILGTLPEMGSLAHRKLASMATSLNSKRLMCLSLGTNRVVISSHPETAREILCGTSFSDRPVKESARLLMFERAIGFAPYGTYWRHLRRVATTHMFSPRKISGLESLRQHVASEMVKRTCKEMEENGVVEVRGILHEGSLSNILENVFGTDDSSLSSQTKELLGNMVNEGYDLIAKFNWADYFPFKFLDFHGVKRKCHKLAAKVNTMVGQIVEERKRSGKFVGQNDFLSSLLSLPKEEKLGDSDVVAILWEMIFRGTDTVAILLEWIMAMMVLHQDVQTKARQEIDTCVGPNGHVRDSDIQNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVTVPAGTTAMVNMWAITHDSSVWEDPWAFKPERFMKEDVSIMGSDLRLAPFGAGKRVCPGKALGLATVHLWLAQLLHHFIWVPVQPVDLSECLKLSLEMKKPLRCQAICRDNIVSS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03715 522 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 Gene3D Cytochrome P450 52 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 Pfam Cytochrome P450 65 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Rops11g03715 522 PANTHER CYTOCHROME P450 78A7-RELATED 21 516 - -
Rops11g03715 522 CDD CYP78 94 509 - -
Rops11g03715 522 SUPERFAMILY Cytochrome P450 65 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 FunFam Cytochrome P450 78A5 55 516 - -
Rops11g03715 522 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03715 522 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03715 Rops-Chr11 70819815 70821589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03715 18 517 Cytochrome P450 AT1G13710 53.438 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03715 - - gmx:100799715 859.366