Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03697 ATGCTACCTGGTTTGGATTACAACATCAATGAGCTGTATCAAGAAGCTAAGAAAAGATGGCTCAAGCCTGTAGAAGTGCTTTACATTTTAAAGAATCATGAGAAATGTGGGTTCACCAACGTGCCCCCTCATCAGCCAACTGGTGGATCCCTGTTTCTATTTAATAGAAGAATCCAGCGTTTCTTCCGTAGAGATGGTCATAATTGGCGGAAGAAAAAGGATGGCAGAACTGTGGGAGAAGCACATGAACGGCTAAAGGTTGGAAATGTTGAAATCATAAACTGTTACTATGCACATGGAGAGGAGAATCGTACTTTCCAGAGACGGAGCTATTGGATGTTGGACCCGGAATATGATCATGTTGTTCTAGTGCATTACAGAGAAACAAATGTGGGGACATCCAAATCTGGACCTGTCAAACAATTGTCACCAGGTCCCTCTTCTATGTTTAGTCAGAATCATAGCTCGTATACTACTCAGAACCCAGGGACAGCATCCATTTTTGGTGATTCATGTGAACCTAATCAGAATTTCTCCAGCCCTGGGTCTTTAGAAGTTACCTCCGATGTACTCATCAGAAACAATGGAATGGATCACTTGGATGAAACAGGTGCACAAACTTTGCACCAATTGGAAATCTGCAGTGAAATTCCACATGAGTTAACCCCATGCCAAGATCAAAGGGTGGTTTACCAGCAAGAGAAATATGCAGCTTTCTCAGGACCCGATGATCGGGAACAACCTTATGATGGATATAATGGAATACCAGGGGTGCTGGAATCATGTAAGCCTTCATCCATGATCAAGTTACCCGAGCAACATACATATGAGGCATTTGGAATTGAAATGTCACTATCTTCCTCAGGAAGGGAAATGTTTGCCAACCAGGAAAACAGCCACTGGATAAACCCCAACAGTACTTATGCTGAAAACTCTGTCTTCTCAATTCCTCTAGATCCTCCATATGCTTTGGTAGAAACTCAAGGAACTGGTTATGGCTACAATGCAACATGGTTTGAGCAAATCCAAATTCAAGAACCTCTGGGTGCAGATTCAAGCTTGACCGTCACACCGGAACAGAAATTTACAATTAAGGCAGTCTCCCCGGAATACTGTTATGCCACTGAGACTACAAAGGTGATCATTGTTGGGTCATTTATCTGCCCTCCCTCAGATTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAGATAATTCAGGATGGCGTAATCAGTTGTGAAGCCCCGTCCCATCTTCTTGGAAAGGTCACTCTGTGCATTACTTCAGGAAATAGGGAGCCATGCAGTGCAGTCAGAGAGTTTGAATTTCGTAATAAGACCAATAGTTGCACTCGCTGTAATTCATTGGAAGCAGGACCTGTTAGAAGTCCAGAAGAGCTGTTATTACTTGTTCGATTTGCAGAGATGCTCCTTTCTGCTTCGACTACAAAGGATGACCGAATAGAATCTGGAAGTCATTTTCCAACAAAACAGAAATCGGATGATGATTCATGGAGCCATATTATAGATGCTCTCCTAGTTGGCAGTGGAACTTCATCTAGTACTATTGATTGGCTTCTTGAAGAGCTGCTGAAGGATAAGCTGCAGCTCTGGCTTTCTTGCAGATCCCATCAAAGTGATGAAGGGACAGGTTGTTCGTTATCCAAGAAAGAGCAGGGGATTATACACATGGTTTCTGGGCTGGGTTTTGAGTGGGCTTTAAACCCCATTCTCAATTGCGGTGTGAATGTAAATTTCCGGGACATCAATGGATGGACTGCTCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGTTGCACTTATAGCTGCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACTTCACAAGATCCAACAGGTAAAACTGCCGCGTCTATTGCGGCCAGCAATGGCCGTAAGGGGCTGGCAGGTTATCTGTCAGAGGCAGATCTAACAAGCCATCTGTCATCCCTCACATTGGAAGAGAGTGAGATATCTAAAGATTCTTTTGAGCTGCAAGCCGAGTTAACTGTCAGTAGTGTCTCTAAGGAAAATCTCGTAGCCAGTGAGGATCAGGTTTCGCTACAAAATAGCTTGGATGCTGTCAGAAATGCAACTCAGGCAGCTGCACGGATACAGGCTGCTTTTCGTGAACATTCTTTCAAAAAACGAAAAGAGAGAGAATATGCTGCTGCTGCTGCCTTTCTAGATGGATATGGTATCAGTGCAGATAGCATTGAGGATAACATTCCAGTGCTTGCTGCCATGTCAAATCTAAGCTTTCGGACCTTGCATCATTACAATTCAGCTGCCGTGTCAATTCAAAAGAAATATCGAGGTTGGAAAGGTCGCAAAGAATTCTTAGCATTGCGCCAGAAAGTAGTAAAGATACAGGCTCATGTGAGGGGTTACCAGGCTCGAAAGCAATACGAGCTAATGATATGGGCGGTTGGAATCTGGGACAAGGTTGTGCTAAGATGGCGAAGAAAACATGTTGGTTTACAAAGTTTCAAACGAGAAAGGGAGTCAGATGAAGAAAGTGATGATGAAGATTTTCTCAAGGTGTTCCGGAAAGAGAAAGTACATGGAGCAATTGAGAAGGCTTTGGCACGGGTGCTTTCCATGGTCCGTTCTACTGGTGCTCGTCAGCAATATAGCCGCTTGCTTGAGATGTATCGTAAAGCCAAGGCTGAACATGGCAGCACGAGTGATGAAACGCTGTTATCAACTTCTGTAGAGGATGCTTTCAATATGGGAGATGATGATTTGTTTAAATTTCTCTGGGAAATGCGCTAG 2814 0.4389 MLPGLDYNINELYQEAKKRWLKPVEVLYILKNHEKCGFTNVPPHQPTGGSLFLFNRRIQRFFRRDGHNWRKKKDGRTVGEAHERLKVGNVEIINCYYAHGEENRTFQRRSYWMLDPEYDHVVLVHYRETNVGTSKSGPVKQLSPGPSSMFSQNHSSYTTQNPGTASIFGDSCEPNQNFSSPGSLEVTSDVLIRNNGMDHLDETGAQTLHQLEICSEIPHELTPCQDQRVVYQQEKYAAFSGPDDREQPYDGYNGIPGVLESCKPSSMIKLPEQHTYEAFGIEMSLSSSGREMFANQENSHWINPNSTYAENSVFSIPLDPPYALVETQGTGYGYNATWFEQIQIQEPLGADSSLTVTPEQKFTIKAVSPEYCYATETTKVIIVGSFICPPSDSTWACMFGDVEVPVEIIQDGVISCEAPSHLLGKVTLCITSGNREPCSAVREFEFRNKTNSCTRCNSLEAGPVRSPEELLLLVRFAEMLLSASTTKDDRIESGSHFPTKQKSDDDSWSHIIDALLVGSGTSSSTIDWLLEELLKDKLQLWLSCRSHQSDEGTGCSLSKKEQGIIHMVSGLGFEWALNPILNCGVNVNFRDINGWTALHWAARFGREKMVVALIAAGASAGAVTDPTSQDPTGKTAASIAASNGRKGLAGYLSEADLTSHLSSLTLEESEISKDSFELQAELTVSSVSKENLVASEDQVSLQNSLDAVRNATQAAARIQAAFREHSFKKRKEREYAAAAAFLDGYGISADSIEDNIPVLAAMSNLSFRTLHHYNSAAVSIQKKYRGWKGRKEFLALRQKVVKIQAHVRGYQARKQYELMIWAVGIWDKVVLRWRRKHVGLQSFKRERESDEESDDEDFLKVFRKEKVHGAIEKALARVLSMVRSTGARQQYSRLLEMYRKAKAEHGSTSDETLLSTSVEDAFNMGDDDLFKFLWEMR* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03697 937 ProSiteProfiles IQ motif profile. 773 802 IPR000048 GO:0005515
Rops11g03697 937 ProSiteProfiles IQ motif profile. 796 820 IPR000048 GO:0005515
Rops11g03697 937 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 904 - -
Rops11g03697 937 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Rops11g03697 937 SMART CG_1_2 12 130 IPR005559 GO:0003677
Rops11g03697 937 Pfam Ankyrin repeats (3 copies) 576 657 IPR002110 GO:0005515
Rops11g03697 937 FunFam Calmodulin-binding transcription activator 2 772 820 - -
Rops11g03697 937 ProSiteProfiles Ankyrin repeat profile. 593 625 IPR002110 GO:0005515
Rops11g03697 937 MobiDBLite consensus disorder prediction 133 154 - -
Rops11g03697 937 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Rops11g03697 937 CDD IPT 363 447 - -
Rops11g03697 937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 765 823 IPR027417 -
Rops11g03697 937 Gene3D - 512 658 IPR036770 -
Rops11g03697 937 SMART ANK_2a 632 661 IPR002110 GO:0005515
Rops11g03697 937 SMART ANK_2a 593 622 IPR002110 GO:0005515
Rops11g03697 937 Gene3D - 772 820 - -
Rops11g03697 937 Pfam IQ calmodulin-binding motif 798 816 IPR000048 GO:0005515
Rops11g03697 937 Pfam IQ calmodulin-binding motif 775 793 IPR000048 GO:0005515
Rops11g03697 937 Gene3D Immunoglobulins 357 452 IPR013783 -
Rops11g03697 937 SMART iq_5 772 794 IPR000048 GO:0005515
Rops11g03697 937 SMART iq_5 795 817 IPR000048 GO:0005515
Rops11g03697 937 SUPERFAMILY Ankyrin repeat 564 654 IPR036770 -
Rops11g03697 937 FunFam Calmodulin-binding transcription activator 4 isoform A 473 658 - -
Rops11g03697 937 Pfam IPT/TIG domain 363 434 IPR002909 -
Rops11g03697 937 SUPERFAMILY E set domains 363 447 IPR014756 -
Rops11g03697 937 ProSiteProfiles Ankyrin repeat region circular profile. 593 619 - -
Rops11g03697 937 ProSiteProfiles IQ motif profile. 711 740 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03697 Rops-Chr11 70535433 70546081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03697 5 932 CAMTA Transcription Factor Family AT1G67310 48.970 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Rops11g03697 CG-1 8.8e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03697 K21596 - gmx:100791430 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03697 11 70535433 70546081 Rops2g01337 2 19099055 19112866 PCT