Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03696 ATGTTGAAATCCTTCGTGAAAAGCCTAAGCCTTCAATCGAAGTGTATCCAGCACAAGAATGAAGTTGATAGTACTGAGTCACTGCATGGTGAAAACTTGGTTGTTTTGCCTGTGCAGAGGGCAAACTGCAATGTTTGCATAGAGGAAAGCAAACAATGCAATTGTGACCACATCATTGTTGAGGAAGGTGTCAATGTCGACGCCATGCATGATGCTAACGCCACTAGTTCTTTTGTTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTCTTGAAAAAGGAGGCTGGGCATCTGTATTCTTGCTTATGGGACTTGGGGTGATGTGTGCTTATAGTTCTCATATACTTGGAAAATGTCTTGCAAAGAATCCAAAGTTAAGAAGTTACGTGGATATTGGGAATCATGCATTCGGAACAAAAGGAAGATTCCTAGCTGCAACATTAGTCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATATCATTACACGACAACTTGATCAGTGTCTTTTTAGGGACACATATGAAGCTGCACTTGGCTAAGTTATCTACATCCCAGCTCCTAACCGGGGTGGCAGTCTTGATTGCTCTTCCTAGTTTGTGGATCAGAGATTTGTCTTCCATATCTTTCCTTTCAACTGGTGGTATTCTCATGTCTCTTCTCATTTTCTTGTGTGTAGCAACCACTGCAATTTTTGGAGGTGTCCAATCTAATCATACCATACCTATCTTCCACCTCCATAATATTCCATCAATATCTGGCCTTTATGCCTTTGGTTATGGAGGACATTTTGTTTTCCCTGATTTATATAAATCCATGAAAGACCCCTCAAAATTTACCAAGGTTTCTATTGTGAGCTTTACTATAGTTACAGCACTTTATACTACATTGGCATTCATGGGTGCAAAAATGTTTGGGAATGATGTCAAGTCACAGATCACTCTAAGCCTGCCAAAAAACCAAATTGTAACAAAGATTGCTCTTTGGGCAACCGTGTTGACTCCCATGACCAAATATGCACTTGAATTTGCACCATTTGCAAGTCAGCTTGAGCATGCACTTCCAAAGTCCACAAGTCCTCACTGGTTCCCTAATCAGTGTAGCCATCTGTTTGATTTTGCCTTGTCTTTTCTACATGAAGATTTGTTGGGGTCAAATATCAAAGCCTCTCTTAGTCCTTAA 1218 0.4097 MLKSFVKSLSLQSKCIQHKNEVDSTESLHGENLVVLPVQRANCNVCIEESKQCNCDHIIVEEGVNVDAMHDANATSSFVHAVINMVGMLIGLGQLSTPYALEKGGWASVFLLMGLGVMCAYSSHILGKCLAKNPKLRSYVDIGNHAFGTKGRFLAATLVYMEIFMSLVSYTISLHDNLISVFLGTHMKLHLAKLSTSQLLTGVAVLIALPSLWIRDLSSISFLSTGGILMSLLIFLCVATTAIFGGVQSNHTIPIFHLHNIPSISGLYAFGYGGHFVFPDLYKSMKDPSKFTKVSIVSFTIVTALYTTLAFMGAKMFGNDVKSQITLSLPKNQIVTKIALWATVLTPMTKYALEFAPFASQLEHALPKSTSPHWFPNQCSHLFDFALSFLHEDLLGSNIKASLSP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03696 405 Pfam Transmembrane amino acid transporter protein 75 368 IPR013057 -
Rops11g03696 405 PANTHER AMINO ACID TRANSPORTER 68 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03696 Rops-Chr11 70485903 70488907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03696 43 369 Amino Acid or Auxin Permease AAAP Family AT5G16740 63.333 1.01e-143 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03696 - - lang:109342470 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03696 11 70485903 70488907 Rops11g03696 11 70485903 70488907 ECH