Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03677 ATGGATAACCAAGATCAAAGAAGAACTCACACTCAAGGACATGAGAGTCATGGAGTTCATGTATGTCACAAATGTGGATGGCCTTTCCCCAACCCTCACCCGAGTGCCAAACATAGGCGTGCTCACAAGAAAATATGTGGAACCATTGAAGGGTACAAACTGTTAGTTTCAGAGAGCCAACCCCATTCCAACGCTTCAGATGATGAACATGAACACCTTTCTGATGATGATCGCAACACACAAGGTCCAAACGCCTTGGACATTGGTAACAACGAGAAAAGTAGTGGTGGAACCAGAGAAAATTTAATTAGATCAGGTGATGAGGTGTTTTTAGATGCAATTGCAAACTTTTCAGATGGTGGACTGCGAGATAGTCTGGAATCAGGGTATTCTGGGGACAATGATTCTAATGCTCCAGATGTAAGTCAGCTAATTGTCAAGTCAATAGATGATGGCCAAATGCAAGATCCTAATACTTTGCAAAGTGGAAGAATTGAGGATGGAAATATGCTAGAGTTGCAAGGTCAACTGTCAGACTCTCCTGTGGATGCATTATCAAGTTGCATAACAGATTTGAGGACCAAAGAATTGACTGTTGTACATAGTGATGATTGCTTTAGTTTGTCAAGTGACTCAAGTCCCAGCAAAGCTGAAGCTGCACCAGCTGAGTTGCTAGAAGATAAGATCTATTCTGGTGAAAATGTGAGGGGTTACAGTTTAACATCTGTTACAAAGGAGCAGAACAACTGCGAGCTTGTGAATGAAGAAATGCACGCTGAAGAGAGCTTTGAAGTTTCTTCCATCAAGTTCATGGTTGAAAGTGATAAAAGATTAATTGAAACTGGAGTCTCTATGAATGCTGTGAAAACTGAGATGAATGAGAATCATATCATTCACTTTTCAGAAGAACAGGAATCTGATGATGTTCCTACAAATTCACAAAAGATTAGTTTACCAGAAGGTAGTTTCATGGCTGCATCAAAAGAGAATCTCACTGATGCATCCTTTGGTGGTTCAACCATTAGTGTGACCAGCACAGACAATGTAAGTCATCAAGAGAAAAACTTAAAGGAAATAAATGCCGTAGCTGTGGATGATAAGTGCAGAGGAGCTAATGTTGAAAATGATATCGGAATCAGCATAAGAAGTCCTCAACCCAATAACCTGCATTTGGAAGTAAAGCCATCAAGTGGTGTATATAAGGGTGACGAGGCTGTTGAAATGGGTAAAATTGAAAAATGTGATATAACTGATGGTCAATATATGGAAAGACCCATTGTGAAAGATACTTCATTGCCCAAGTCTGCTAGCAGTGATTTTGAATGTCCCATACTTCCAGAGGTTGTAATGGATAGGTCTGCAAGGACACAGAAAAATATTGAGTGCACAAATAGAGGTCCTCTACTAGGTGCTCAGGAAGACATCAAAGATGATGAAATCAATAGCGATGGCAGAGGAAACGAAGACTGTAATAGATTTGTTGGTTTTTCTGTTGATTCACATCAAGCACAAGATGAAGAACTATTGATGAAGACAGTAGAAGACCTTGGTAGGAACTATTCATCACACTCTTCTTTAAATATTGAGCCTGTTCAAGCTCAAAGTAATAATAATGAGGTCAAACCAGCTTCATCTGCGATTGACACTAAACTGGACTCTGGTAGCCGGGGTGACAGTTTGGAAGGAAACTGGGGGTCTGTTTCAGTTTCAGGAGGTTTAGCATCAACTGATCTGCTAGCATCAACTGAATCAGGGAAATCCAACTTGAAGGATCCGAAGGCTGCATCCCAGAGACAGCAATATGAAAAACCAGAAATGTTTGAACCACCATCTTTCATGACATGGGTTGAACCTGGACATGTGGTTGGTCCAAATGCTGCTACATCTGAAGTCCAGAAGGAACCGAACCAACAACATCCAACTTCCACCACTTTGCAGGCTGGTTGGTTTCCCACTATAACTCAAGCCTTTAATGAGTCTCTAGGGAGAAAGAGGAATGAAGAAACAATAGCTAAGATAACAAAACGGAGGACCGATAAGCAGGAAAAACCTCTAAAGACTCTATTGAGTGAAGCTGCCCAAAACAACAAGCCAAAGTCTCCAAAATTGGAAGAAAGTTCAGTGAATCAGAAAAATAGTGAAGTAAGGGAAGTTAATGGTTTTGGATTGACAAGTGTTAACTCCATTGTGGGGCCTGAATCACCTGCCACCAAGGCTGTAAAAGGAAAGGGTGGAAAAGAATGGAACTCCCCTTCAAGACACCCTGCAGGAATCAAGAAACAAAATAAGAAAGTAAAGAGCAAACCATACTGGATACAATTTGTATGCTGCTCATCTGTGGATTCTCAGCGAAGCTAG 2358 0.4092 MDNQDQRRTHTQGHESHGVHVCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKLLVSESQPHSNASDDEHEHLSDDDRNTQGPNALDIGNNEKSSGGTRENLIRSGDEVFLDAIANFSDGGLRDSLESGYSGDNDSNAPDVSQLIVKSIDDGQMQDPNTLQSGRIEDGNMLELQGQLSDSPVDALSSCITDLRTKELTVVHSDDCFSLSSDSSPSKAEAAPAELLEDKIYSGENVRGYSLTSVTKEQNNCELVNEEMHAEESFEVSSIKFMVESDKRLIETGVSMNAVKTEMNENHIIHFSEEQESDDVPTNSQKISLPEGSFMAASKENLTDASFGGSTISVTSTDNVSHQEKNLKEINAVAVDDKCRGANVENDIGISIRSPQPNNLHLEVKPSSGVYKGDEAVEMGKIEKCDITDGQYMERPIVKDTSLPKSASSDFECPILPEVVMDRSARTQKNIECTNRGPLLGAQEDIKDDEINSDGRGNEDCNRFVGFSVDSHQAQDEELLMKTVEDLGRNYSSHSSLNIEPVQAQSNNNEVKPASSAIDTKLDSGSRGDSLEGNWGSVSVSGGLASTDLLASTESGKSNLKDPKAASQRQQYEKPEMFEPPSFMTWVEPGHVVGPNAATSEVQKEPNQQHPTSTTLQAGWFPTITQAFNESLGRKRNEETIAKITKRRTDKQEKPLKTLLSEAAQNNKPKSPKLEESSVNQKNSEVREVNGFGLTSVNSIVGPESPATKAVKGKGGKEWNSPSRHPAGIKKQNKKVKSKPYWIQFVCCSSVDSQRS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03677 785 MobiDBLite consensus disorder prediction 79 100 - -
Rops11g03677 785 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 241 780 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 63 78 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 688 732 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g03677 785 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Rops11g03677 785 MobiDBLite consensus disorder prediction 582 602 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 59 100 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 530 563 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 660 764 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 530 552 - -
Rops11g03677 785 MobiDBLite consensus disorder prediction 661 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03677 Rops-Chr11 70291771 70295482 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops11g03677 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03677 - - cam:101496977 591.652