Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03673 ATGGCACTAAAATTGAAAACCCTACTTTCTCTGTTATGGTGGTTCACGGTGGTGTGCGCGGCCATCGCCGACGATGGTGCATTCATGTCGAAGCTAGCGAAAGCGCTGACTCCAACGCCGTCGGGTTGGTCGACGACCTCCGGCGGCGGGTCCTGCAGTTGGAACGGCGTGAGGTGCGATAGCTCCAACCGTGTGACGATGATAAACCTTCGATCCATGTCACTGAATGGAACGTTACCTTCCGATCTGAACTCGCTTGAGCAACTCACTACTCTCTCTCTCCAGAACAACTCTCTCTCCGGCGAGTTACCGTCATTGGCGAACCTCACGATGCTACAAACGGTGTACCTCGACGGAAATAACTTCACCTCCGTCGCTGATGGTTGCTTCCAGGGGCTTACCAACTTGCAGACGCTAAGCATGACTGATAATATTAATCTCAAGCCATGGACGATTCCAGCTGAGTTGACTCAGTCGTCTAACCTCGTGGAACTCGACCTCGGAAACACTAACCTCGTTGGTACCTTGCCGGATTTTTTTGGTCCCTTGGTGAGTTTGCAGGGGCTTCGTTTATCCTACAACAATCTCACTGGGGGTTTGCCAGAGTCTTTTGCAGGATCTGGGATTCAGAATTTGTGGCTCAATAATCAGAAAGATGGGTTTGGTTTAACGGGTTCCATTGAGGTGCTTGCTTCCATGACGCACTTGTCTCAGGTTTGGCTTCACAAGAATCTCTTCACGGGTCCCATTCCTGATTTGTCTAACTGTACTAGTTTGTTTGATCTGCAACTTAGGGATAATCAGTTAACTGGTGTGGTTCCACCTTCTTTGATGGCTTTATCGAGCTTAAAGAACGTTTCTTTGGATAATAACAAGTTGCAGGGTCCTTTTCCCTCATTTGGGAAAGGTGTGAAGATTACTCTTGATGGGATCAATAGCTTTTGTCAAACCACTCCTGGACCTTGTGATCCGAGGGTCGACACTTTGCTTGATATTGCTGAAGATTTTGGGTACCCCCTTAAGTTAGCGAATTCATGGGAAGGGAGCAATCCTTGTCAAGCTTGGAGCTTTATTATTTGTGCAGAGGAGAAGATTATTACGGTGAATTTAGCTAAGCAGAATTTGAATGGAACCATTTCACCTGCTTTTGCCAATTTAACTGATCTGAGGAACTTGTATCTCAGTGGTAACAATTTGACAGGTTCAATACCGGGGAACTTGACTAATTTGGCTCAACTTGAGGTTATTGATGTGTCTGATAACAACCTATCCGGAGAGATTCCCAAATTCTCATCTAAGGTGAAATTCAATTATACAGGTAATGTTTTGCTTGGGCGTTCTGGAGGTGGTGGAGGCAGTGGAACCACCCCATCATCGGGTTCTGGTGATGCACCAAGTGGAAGTCCATCTGGAAAGGCTGGTGGTTCTTCATTGTCACCTGGTTGGATAGCAGGTATTGCCATTATTGCTGCATTCTTTGTTGCAGTGGTGTTGTTTGTCTTTTGTAAGTGTTATGCCAAAAACCGGCATGGGAAATTCGGAAGGGTTAATAATCCTGAAAACGGAAAAGGTGAAGTTAAAATTGATATAATGAGTGTTAACAATTCCAATGGATATGGTGGAGTTCCAAGCGAGATACAGAGTCAGGGCAGTGAGCGTAGTGACCTTCAAGTCTTTGAGGGTGGAAATGTTACAATTTCTATCCAAGTTCTTCGGCAAGTGACCAATAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGGTTTGGAGTTGTTTATAAAGGGGAATTGCATGATGGAACTAAAATTGCTGTGAAGAGGATGGAATCTGTTGCTCAGCAAAGTAAGGGAATGAATGAGTTCCAAGCAGAGATTGCAGTTCTCACTAAAGTAAGGCATAGACATTTGGTTGCTCTTTTAGGATATTGCATGAACGGCAATGAAAGGCTTTTGGTGTACGAGTATATGCCTCAGGGGACATTAACACAACATCTGTTTGATTTGCATGAAAATGGTTGTGCTCCATTGACTTGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCACGGGGAGTGGAATACTTGCACAGCTTAGCTCAGCAAAGTTTCATTCACAGGGACTTAAAGCCCTCGAACATACTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTAAAACATGCACCAGATGGGAAGTATTCTGTTGAGACACGGTTGGCTGGAACATTTGGATATCTGGCACCTGAATATGCAGCTACTGGAAGAGTCACTACCAAAGTAGATGTTTACGCATTCGGAGTAGTTCTGATGGAACTGATTACCGGTAGAAGAGCATTGGATGATACAATGCCTGATGAAAGATCTCACTTGGTTTCATGGTTCCGTAGGGTACTAATCAACAAGGAGAACATCCCCAAGGCAATTGATCAAACACTCAACCCCGATGAGGAAACCATGGAGAGCATATATAAAGTAGCTGAGCTGGCAGGGCACTGCACTGCTCGGGAACCATACCAAAGGCCAGATATGGGGCATGCAGTGAATGTTTTGGTTCCTCTGGTAGAGCAATGGAAGCCTACCAACCATGCAGAAGAAGAAGGGTATGGTATTGACCTTCACATGAGCCTTCCTCAAGCTCTTCGAAGATGGCAAGCCAATGAAGGGACTTCCACAATGTTTAATGACATGTCCTTTTCACAAACCCAGTCAAGCATTCCCGCAAAACCTTCAGGATTTGCTGACTCCTTTGATTCAATGGATTGCCGGTGA 2781 0.4516 MALKLKTLLSLLWWFTVVCAAIADDGAFMSKLAKALTPTPSGWSTTSGGGSCSWNGVRCDSSNRVTMINLRSMSLNGTLPSDLNSLEQLTTLSLQNNSLSGELPSLANLTMLQTVYLDGNNFTSVADGCFQGLTNLQTLSMTDNINLKPWTIPAELTQSSNLVELDLGNTNLVGTLPDFFGPLVSLQGLRLSYNNLTGGLPESFAGSGIQNLWLNNQKDGFGLTGSIEVLASMTHLSQVWLHKNLFTGPIPDLSNCTSLFDLQLRDNQLTGVVPPSLMALSSLKNVSLDNNKLQGPFPSFGKGVKITLDGINSFCQTTPGPCDPRVDTLLDIAEDFGYPLKLANSWEGSNPCQAWSFIICAEEKIITVNLAKQNLNGTISPAFANLTDLRNLYLSGNNLTGSIPGNLTNLAQLEVIDVSDNNLSGEIPKFSSKVKFNYTGNVLLGRSGGGGGSGTTPSSGSGDAPSGSPSGKAGGSSLSPGWIAGIAIIAAFFVAVVLFVFCKCYAKNRHGKFGRVNNPENGKGEVKIDIMSVNNSNGYGGVPSEIQSQGSERSDLQVFEGGNVTISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAQQSKGMNEFQAEIAVLTKVRHRHLVALLGYCMNGNERLLVYEYMPQGTLTQHLFDLHENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKHAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTMPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHAEEEGYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSQTQSSIPAKPSGFADSFDSMDCR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03673 926 MobiDBLite consensus disorder prediction 451 474 - -
Rops11g03673 926 FunFam receptor protein kinase TMK1 542 655 - -
Rops11g03673 926 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03673 926 SMART LRR_typ_2 183 206 IPR003591 -
Rops11g03673 926 SMART LRR_typ_2 109 132 IPR003591 -
Rops11g03673 926 SMART LRR_typ_2 386 410 IPR003591 -
Rops11g03673 926 FunFam Leucine-rich repeat receptor-like kinase 324 447 - -
Rops11g03673 926 MobiDBLite consensus disorder prediction 448 474 - -
Rops11g03673 926 CDD STKc_IRAK 584 857 - -
Rops11g03673 926 SUPERFAMILY Protein kinase-like (PK-like) 556 854 IPR011009 -
Rops11g03673 926 Gene3D Transferase(Phosphotransferase) domain 1 656 875 - -
Rops11g03673 926 Pfam Protein tyrosine and serine/threonine kinase 581 852 IPR001245 GO:0004672|GO:0006468
Rops11g03673 926 PANTHER OSJNBA0070M12.3 PROTEIN 8 926 - -
Rops11g03673 926 Gene3D Ribonuclease Inhibitor 324 447 IPR032675 -
Rops11g03673 926 FunFam Receptor-like kinase TMK4 23 320 - -
Rops11g03673 926 MobiDBLite consensus disorder prediction 904 926 - -
Rops11g03673 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Rops11g03673 926 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03673 926 SUPERFAMILY L domain-like 53 430 - -
Rops11g03673 926 ProSiteProfiles Leucine-rich repeat profile. 88 110 IPR001611 GO:0005515
Rops11g03673 926 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Rops11g03673 926 Gene3D Ribonuclease Inhibitor 24 319 IPR032675 -
Rops11g03673 926 Gene3D Phosphorylase Kinase; domain 1 541 655 - -
Rops11g03673 926 Pfam Leucine rich repeat N-terminal domain 326 360 IPR013210 -
Rops11g03673 926 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Rops11g03673 926 FunFam receptor protein kinase TMK1 656 873 - -
Rops11g03673 926 ProSiteProfiles Leucine-rich repeat profile. 388 411 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03673 Rops-Chr11 70263567 70267519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03673 68 854 Receptor kinase-like Gene Family AT5G07280 32.845 1.34e-96 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops11g03673 PK_Tyr_Ser-Thr 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03673 - - gmx:100781851 1456.81