Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03636 ATGGATTCGAATTCACATGGGAACCTAGAGAAGCAGATTTCTCAGCTTATGCAATGCAAGCCCTTGTCGGAGCCAGAGGTAAGGGTCCTGTGTGACAAGGCAAAGGAGATTTTGATGGTAGAGAGCAATGTCCAGCCCGTTAAAAGTCCTGTCACAATTTGTGGTGATATTCATGGGCAATTCCATGATCTTGCTGAGCTTTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGATCGTGGCTATTATTCAGTTGAAACTGTTTCACTTTTGGTTGCCCTTAAAGTGCGTTATCCTCAGCGTATCACTATTCTGAGAGGAAATCATGAAAGCCGTCAGATTACTCAAGTTTATGGATTTTATGATGAGTGCCTACGGAAGTATGGTAATGCTAATGTTTGGAAGATGTTTACTGATTTGTTTGATTACTTTCCATTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCCCCATCAATTGAAACCCTTGATAACATACGTAGTTTTGATCGTGTGCAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGTATCTCTCCTAGAGGTGCTGGATATACTTTTGGCCAGGACATATCAGAGCAGTTTAACCATACAAACAACTTGAAGCTAATTGCTAGAGCTCACCAGCTGGTCATGGAAGGATATAACTGGGGTCATGATCAAAAAGTGGTTACCATATTTAGTGCACCTAATTATTGTTATCGCTGTGGAAATATGGCATCCATCCTTGAAGTCGATGACTGCAAAGGACACACATTCATACAGTTTGAGCCAGCTCCAAGAAGAGGAGAGCCGGATGTAACCAGAAGAACACCTGATTACTTTCTATGA 927 0.4196 MDSNSHGNLEKQISQLMQCKPLSEPEVRVLCDKAKEILMVESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKMFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRSFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03636 308 Gene3D - 1 308 IPR029052 -
Rops11g03636 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 7 308 IPR047129 GO:0004722
Rops11g03636 308 FunFam Serine/threonine-protein phosphatase 1 308 - -
Rops11g03636 308 Pfam Calcineurin-like phosphoesterase 50 241 IPR004843 GO:0016787
Rops11g03636 308 CDD MPP_PP2A_PP4_PP6 8 292 - -
Rops11g03636 308 ProSitePatterns Serine/threonine specific protein phosphatases signature. 113 118 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 79 106 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 50 77 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 112 136 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 232 252 IPR006186 GO:0016787
Rops11g03636 308 PRINTS Serine/threonine phosphatase family signature 254 270 IPR006186 GO:0016787
Rops11g03636 308 SMART pp2a_7 22 292 IPR006186 GO:0016787
Rops11g03636 308 SUPERFAMILY Metallo-dependent phosphatases 7 293 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03636 Rops-Chr11 69566803 69571624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03636 14 238 Calmodulin-binding Proteins AT5G63870 34.457 1.93e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03636 K04382 - twl:120016890 635.18