Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03634 ATGTCAATGTGGGAGAAGAAAGAAGTAGAGGAAGTGGGAGAGGCAGAAGCCCAAGTACATATGTGGAAGTACATACTTGGGTTTGTTGAACTGGCAGTGTTGAAATGTGCCATTGAGCTCGGCATAGCTGAAGCCATTGAAAGCCATGGAAGCCCCATGACACTATCAGAGATTTCATCAACACTAGGTTGTGATCCTTCATATCTCAACCGCATCATGAGGTTCTTAGTGTACCGCAAGATATTCAAAACCATACCCACCAACCATGACTCCTTGGGCTATGCACACACACCACTCTCTCGTTGTTTGATGAGAAATGGTAAACAAAGCATGGCTGCTCTTCTTCTATTGGAGAGTAGTCCTGTGATGCTTGCACCTTGGCATAGTCTAAGTGCTCGTGTTTTGGCTAATGGGATACCCTCGTTTGAAAATGCTCATGGTGAAGATGTGTGGCGCTATGCTGCTGCAAATCTTGGTCACAGCAATCTAATCAATGAAGCTATGGCATGTGATGCTAAGGTTCTTGTGCCTGCCATGTTGGAAGGTTGTAGTGAGGTGTTTGAGGGTATTAGCTCCTTGGTGGATGTGGGTGGGGGAAATGGCACCACCACGCGCACCCTTGCTAAGGCTTGCCCTTCGATTCGATTAATCAATTTTGATCTTCCTCATGTCATTGCTGAAGCCCCAAAGTGCGATGGGGTGGAACATGTAGCAGGTAACATGTTTCAAAGTGTTCCCAAAGCTGATGCTGCATTTATTAAGTGGGTTCTACATGACTGGTCAGATGAAGAGTGCATCCAAATCTTAAAGAATTGTAGGGAAGCGGTTGCAGAGAAAAATGGAAGGGTTATTATTGTGGAAGCGGTGATTGCAGAAGGAGAAGAAAAACACGACAAGTTAAAGGACATTGGATTGATGCTAGACATGGTGATGATGGCACACACTAACTTTGGGAAAGAGCGAACACTGAAAGAGTGGGAGCATGTGATCAAAATGGCTGGATTCAGTGGATACACTGTAAAAGCTATCAATGCTGTGCAGTCTGTAATATTGGCTTTCTGTTAA 1065 0.4479 MSMWEKKEVEEVGEAEAQVHMWKYILGFVELAVLKCAIELGIAEAIESHGSPMTLSEISSTLGCDPSYLNRIMRFLVYRKIFKTIPTNHDSLGYAHTPLSRCLMRNGKQSMAALLLLESSPVMLAPWHSLSARVLANGIPSFENAHGEDVWRYAAANLGHSNLINEAMACDAKVLVPAMLEGCSEVFEGISSLVDVGGGNGTTTRTLAKACPSIRLINFDLPHVIAEAPKCDGVEHVAGNMFQSVPKADAAFIKWVLHDWSDEECIQILKNCREAVAEKNGRVIIVEAVIAEGEEKHDKLKDIGLMLDMVMMAHTNFGKERTLKEWEHVIKMAGFSGYTVKAINAVQSVILAFC* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03634 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 354 IPR016461 GO:0008168
Rops11g03634 354 Gene3D Vaccinia Virus protein VP39 105 353 IPR029063 -
Rops11g03634 354 Gene3D - 3 103 IPR036388 -
Rops11g03634 354 SUPERFAMILY "Winged helix" DNA-binding domain 16 107 IPR036390 -
Rops11g03634 354 Pfam Dimerisation domain 33 77 IPR012967 GO:0046983
Rops11g03634 354 Pfam O-methyltransferase domain 127 336 IPR001077 GO:0008171
Rops11g03634 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Rops11g03634 354 FunFam O-methyltransferase family protein 5 103 - -
Rops11g03634 354 PANTHER O-METHYLTRANSFERASE 31 337 IPR016461 GO:0008168
Rops11g03634 354 FunFam O-methyltransferase family protein 105 353 - -
Rops11g03634 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03634 Rops-Chr11 69527338 69529714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03634 11 340 Monolignol Biosynthesis Gene Families AT5G54160 37.168 1.55e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03634 K22588 - gmx:100782951 509.22