Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03595 ATGTCTTTCACACATAGTGCTACAATCACTATCATTGTATCAACTGAGGATACTTTGGCTGCTGATGAAGGGGTTGACGACAACAAGCTGCTTTTGGCAATGAATAAAATATGGCCATTCCAGGTTACTTGTATTCAGAACAGGAACCCAGTGTTCTATTTCAAGGATGAGAGGACCCCTTTACAACTCCCCTTTAGAAGCAATTTTATACAAAGGCAACAAAGGAACAACAAGTTTCTGCAAGCTTTCAAATTGAAGCCTTTAAAACTCTGTGGGTATTGGTTGCCAAGTGTTGTTCCTATGCATAGCAATATTTCATTTAAAGAAAGATATGAGGGTTTCCTTTCCATATTGGGCATCTCCAAAGGTCTTCAAGAAGAATTGAAGTACTTGAAATTGGATATTGTTGAGAAGGTTATTGGGAAAGTATTGGTCCTTGATGAGATAATCAATTATATCCAATTGCTTTACTGCCAAGTAGAGTTTTTGTCGGTGAAGCTTCCAGTGGTAAATTCAAGATTGACCTCGGGCCTTAAAGTGTTTCCTCCTGAAGATTAA 558 0.3817 MSFTHSATITIIVSTEDTLAADEGVDDNKLLLAMNKIWPFQVTCIQNRNPVFYFKDERTPLQLPFRSNFIQRQQRNNKFLQAFKLKPLKLCGYWLPSVVPMHSNISFKERYEGFLSILGISKGLQEELKYLKLDIVEKVIGKVLVLDEIINYIQLLYCQVEFLSVKLPVVNSRLTSGLKVFPPED* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03595 185 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 137 181 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03595 Rops-Chr11 68826690 68831909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03595 124 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 60.000 1.47e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03595 - - lang:109332242 75.0997