Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03594 ATGATGGCAACTTGGGATAACTCAGAAGAAGAAGATGAGGAGTCTCAAGAAGAAACAGTCAACATATGCCTAATGGCTGATTCTGATGATAAGGAAAAGGTAAATGATCCTAAACCAGAACCAGCACACAACACTGATAGTGAAAAAGAGGTTTGCCTAGTAGCAACAAGAAGAAAATCAGAATGGTATCTAGACAGTGGCTGCTCCAGGAATATGACAGGAGAAAGGAATTTGTTCCTGACCCTGGAACCTGCTAACTTGGGCAAAGTGACCTATGGCGACAACAAGAAAGGACTCATCAAAGGATCTGTTCATACTCATCCCAGAATTTTTATTCAACTTGAAGGAGATAACGGTGTTCTCTTCCATGACAAGCTTCTTTTGAATACCATCAAGCCGGTTAAAGATCCTTCTCTTCCTCTAAAAATATTCCCAAAGACCTTTGTGTTGCAATCTGAATCCATAGATACATGGAATCCAACTGCAACCATATTTAAGAGTGATGAGATAAACGATACTCTGGTCCCTATAGTGGCCTCTTTCTCTTCTAGGGGTCCAAACATTGTTACACCTGAAATTCTGAAGCCGGATATAGTGGCTCCTGGAGTTTCCATTCTAGATAGTTGGTCTCTAATTTCCCCTCCTTCTGATGTTGAAGATGACAACAGAACATTACAGTTCAATATTATCTCAGGAACATCAATGTCTTGTCCACATGTTTCTAGGGCTGCAGCATACATCAAATCATTTCATCCAACTTGGCCTCCTGTTGCTATTCGTTCAGCTCTAATGACAACAGCTAAACAGCTTAGTCCCAAGACTAACCGTGATGCAGAATTCGCATATGGAGCAGGCCAAATCGATCCTTCCAAGGCTATGAATCCCGGTTTAGTATATGATGCTAGTGAAATAGACTATGTAGCATTTTTATGTGGACAAGGCTATAGTTCAAGGACTTTACAACTCATCACAGGGGATAATAGTAGTTGCCCAAAAACAACTTATGGTACAGCAAGGGATCTAAACTACCCTTCATTTGCTCTTCATGTTCCACCCTCCAACTCCAGTGTAAGTGGAAGTTTTCACAGGACTGTTACAAATGTTGGGTTACCAATCTCCACATATAAAGCTATTGTGACTGCTCCTCAAGGACTGAAAATTGAAGTGAACCCCAGTGTCCTATCATTCACTTCTCTTTACCAAAAGCAAACATTTGTGCTCACAATTGAGGGAACAATAGAAGAACCCATGGTTTCAGCCTCGTTGGTTTGGGATGATGGTAAATGCCAAGTGAGGAGCCCCATTATTGTGTTTAATACACCATGA 1326 0.411 MMATWDNSEEEDEESQEETVNICLMADSDDKEKVNDPKPEPAHNTDSEKEVCLVATRRKSEWYLDSGCSRNMTGERNLFLTLEPANLGKVTYGDNKKGLIKGSVHTHPRIFIQLEGDNGVLFHDKLLLNTIKPVKDPSLPLKIFPKTFVLQSESIDTWNPTATIFKSDEINDTLVPIVASFSSRGPNIVTPEILKPDIVAPGVSILDSWSLISPPSDVEDDNRTLQFNIISGTSMSCPHVSRAAAYIKSFHPTWPPVAIRSALMTTAKQLSPKTNRDAEFAYGAGQIDPSKAMNPGLVYDASEIDYVAFLCGQGYSSRTLQLITGDNSSCPKTTYGTARDLNYPSFALHVPPSNSSVSGSFHRTVTNVGLPISTYKAIVTAPQGLKIEVNPSVLSFTSLYQKQTFVLTIEGTIEEPMVSASLVWDDGKCQVRSPIIVFNTP* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03594 441 Gene3D Peptidase S8/S53 domain 172 306 IPR036852 GO:0004252|GO:0006508
Rops11g03594 441 ProSiteProfiles Serine proteases, subtilase domain profile. 1 293 - -
Rops11g03594 441 Pfam Subtilase family 178 285 IPR000209 GO:0006508|GO:0008236
Rops11g03594 441 MobiDBLite consensus disorder prediction 1 49 - -
Rops11g03594 441 Gene3D - 310 439 - -
Rops11g03594 441 MobiDBLite consensus disorder prediction 1 18 - -
Rops11g03594 441 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 143 437 IPR045051 -
Rops11g03594 441 Pfam Fibronectin type-III domain 340 437 IPR041469 -
Rops11g03594 441 SUPERFAMILY Subtilisin-like 176 294 IPR036852 GO:0004252|GO:0006508
Rops11g03594 441 Gene3D - 156 171 - -
Rops11g03594 441 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03594 Rops-Chr11 68775960 68796955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03594 157 438 Subtilisin-like Serine Gene Family AT5G58830 48.958 8.96e-87 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03594 - - gmx:100795826 461.84