Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03588 ATGGCTAGCACTAGATTTTTTGCTCTTTTGCTGCTCCTATTTTGCTTCACTTCACTTCTTCTGATATGTCACTCAACAACACCCGCATTGAAGAGTTACATTGTCTACACTGGCAACAGCATGAAAGATGAAGCTTCTGCATTGACCTTTTACACAAGCATGCTACAAGAAGTTGCAGACAGCAATGCTGAGCACAGGTCTATACTGCACCACTACAAACGTAGTTTCAGTGGCTTTGTTGTGAGCCTAACTGAGGAAGAAGCAGATAGAATGGCTGGACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTCCTTACAACAAGGTCTTGGGATTTTATTGGCTTTCCATTACAAGCTCAAAGAGCACCAACTGAAAGTAATGTCATTGTTGGAGTACTTGACACTGGAGTCTGGCCAGAATCTGAGAGTTTCAACGACAAAGGATTTGGTCCACCACCTAGTAAATGGAAGGGCACATGCCAAACTACTAACTTCACATGCAATAACAAAATCATTGGAGCTAAGTATTACAAAGCTGATGGATCATTTAATGATGGTGATCTAAAATCTCCAAGAGATTCAGATGGTCATGGTACTCATACAGCATCAACAGCAGCTGGGAATCCTGTTAGCACAGCTAGCATGTTAGGCCTTGGACAAGGAACAGCAAGAGGTGGTGCTATATCAGCACGCATTGCTGTCTATAAAGTGTGTTGGTTAGGTGATTGTTCCGATGCAGACATACTTGCTGCATTTGATGATGCTATTGCAGATGGGGTGGATGTAATATCAGTTTCTCTTGGACTGTATAGTGATACTAACTATTTCAGAGATGTAATAGGCATTGGAGCATTTCATGCAGTGAGAAATGGAATATTGACAGTTGCTTCAGCAGGGAACTCAGGTCCAAGACCTTCCTCACTATTTAATTTTGCACCTTGGTTAATTACTGTGGGTGCTAGCACCATAGACAGGATGTTTGTTACCAAGGTTGAATTAGGCAACAACAGAACTTATGAGGGAACCTCAATAAATACATTTGACCTTAACGGACAATTGTATCCTATGATCTATGGTGGAGATGCACCGAACACTAATGAAGGCTATGATGAATCTTCATCCAGGTTATGCAGCAGTGATTCGTTGGACAAAAAATTAGTTAAGGGTAAAATTGTTCTCTGTGATGGCAGAAGCCAAGCTACAGGCCCCTTTGATGCTGGTGCTGTTGGGGCACTGATACAAGGTCAACGTTTTAGAGATATAGCTCCCACTCTTCCATTGCCTGGATCTTACCTTGACTTGAAGGATGGTGCTTCTGTGTTTGAATACACAAACTCTACAAGGAATCCAACTGCAACCATATTTAAGAGTGATGAGATAAAAGATACTCTGGCCCCTGTAGTGGCCTCTTTCTCTTCAAGGGGTCCAAACATTGTTACACCTGAAATTCTCAAGCCGGATATAGTGGCTCCTGGAGTTTCCATTCTAGCTAGCTGGTCTCCAATTTCCCCTCCTTCTGATGTTGAAGATGACAACAGAACATTACAGTTCAATATTATCTCAGGAACATCAATGTCTTGTCCACATGTTTCTGGTGCTGCAGCATACATCAAATCATTTCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTAATGACAACAGCTAAACAGCTTAGTCCCAAGACTAACCGTGATGCAGAATTCGCATATGGAGCAGGCCAAATCGATCCTTCCAAGGCTGTGAATCCCGGTTTAGTATATGATGCTAGTGAAATAGACTATGTAACATTTTTATGTGGACAAGGCTATAGTTCAAGGACTTTACAACTCATCACAGGGGATAATAGTAGCTGCCCAAAAACAACTTATGGTACAGCAAGGGATCTAAACTACCCTTCATTTGCTCTTCATGTTCCACCCTCCAACTCCAGTGTAAGTGGAAGTTTTCACAGGACTGTTACAAATGTTGGGTTACCAATCTCCACATATAAAGCTATCGTGACTGCTCCTCAAGGACTGAAAATTGAAGTGAACCCCCGTGTCCTATCATTCACTTCTCTTTACCAAAAGCAAACATTTGTGCTCACAATTGAGGGAACAATAGAAGAACCCATGGTTTCAGCCTCTTTGGTTTGGGATGATGGTAAATACCAAGCGAGGAGTCCCGTTATTGTGTTTAATACACCATGA 2208 0.4203 MASTRFFALLLLLFCFTSLLLICHSTTPALKSYIVYTGNSMKDEASALTFYTSMLQEVADSNAEHRSILHHYKRSFSGFVVSLTEEEADRMAGLDGVVSVFPNEKKQLLTTRSWDFIGFPLQAQRAPTESNVIVGVLDTGVWPESESFNDKGFGPPPSKWKGTCQTTNFTCNNKIIGAKYYKADGSFNDGDLKSPRDSDGHGTHTASTAAGNPVSTASMLGLGQGTARGGAISARIAVYKVCWLGDCSDADILAAFDDAIADGVDVISVSLGLYSDTNYFRDVIGIGAFHAVRNGILTVASAGNSGPRPSSLFNFAPWLITVGASTIDRMFVTKVELGNNRTYEGTSINTFDLNGQLYPMIYGGDAPNTNEGYDESSSRLCSSDSLDKKLVKGKIVLCDGRSQATGPFDAGAVGALIQGQRFRDIAPTLPLPGSYLDLKDGASVFEYTNSTRNPTATIFKSDEIKDTLAPVVASFSSRGPNIVTPEILKPDIVAPGVSILASWSPISPPSDVEDDNRTLQFNIISGTSMSCPHVSGAAAYIKSFHPTWSPAAIRSALMTTAKQLSPKTNRDAEFAYGAGQIDPSKAVNPGLVYDASEIDYVTFLCGQGYSSRTLQLITGDNSSCPKTTYGTARDLNYPSFALHVPPSNSSVSGSFHRTVTNVGLPISTYKAIVTAPQGLKIEVNPRVLSFTSLYQKQTFVLTIEGTIEEPMVSASLVWDDGKYQARSPVIVFNTP* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03588 735 Gene3D - 328 465 - -
Rops11g03588 735 CDD Peptidases_S8_3 106 561 IPR034197 -
Rops11g03588 735 Pfam Peptidase inhibitor I9 32 107 IPR010259 -
Rops11g03588 735 Gene3D - 604 733 - -
Rops11g03588 735 SUPERFAMILY Subtilisin-like 108 591 IPR036852 GO:0004252|GO:0006508
Rops11g03588 735 MobiDBLite consensus disorder prediction 191 211 - -
Rops11g03588 735 ProSiteProfiles Serine proteases, subtilase domain profile. 113 587 - -
Rops11g03588 735 FunFam Subtilisin-like protease SBT1.5 131 346 - -
Rops11g03588 735 Gene3D Peptidase S8/S53 domain 131 600 IPR036852 GO:0004252|GO:0006508
Rops11g03588 735 Pfam Fibronectin type-III domain 634 731 IPR041469 -
Rops11g03588 735 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Rops11g03588 735 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Rops11g03588 735 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Rops11g03588 735 CDD PA_subtilisin_like 335 458 - -
Rops11g03588 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 108 IPR037045 -
Rops11g03588 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Rops11g03588 735 Pfam Subtilase family 130 579 IPR000209 GO:0006508|GO:0008236
Rops11g03588 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 730 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03588 Rops-Chr11 68539214 68543656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03588 12 732 Subtilisin-like Serine Gene Family AT3G46850 49.459 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03588 - - gmx:100795826 1153.66