Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03570 ATGATTCTGCATCAGATAGAAGCTCTTAAGGCCATTGGAGTTAGTGAAGTGGTCCTAGCTATCAATTACCAACCAGAGGTGATGTTGAATTTCTTGAAGGATTTTGAGGCAAAGCTTGGCATCAAAATCACTTGTTCCCAAGAAACTGAACCACTGGGGACTGCAGGTCCCTTGGCTCTTGCCAGGGATAAGCTGATAGATGACTCTGGTGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAAGAAATGATTGAATTCCACAAAGCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTCGACGAGCCATCAAAATATGGTGTGGTTGTGACGGAGGAGACTACAGGGCAGGTTGAGAAATTTGTAGAAAAACCAAAGGTGTTTGTGGGTAACAAAATCAATGCTGGAATCTACTTATTGAACCCCTCAGTTCTGGATCGAATTGAACTGAAGCCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCATCAGAGAAAAAGCTTTATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATGTTTCTGGCCTGAGACTTTACTTGAACTCACTGAGGAAAAAGAGTCCTTCTATGTTGGCCAGTGGCCCTCACATTTTAGGGAATGTCATTGTGCATGAGACTGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGCATTATTGAGTCAGGTGTCAGGCTTTCATGCTGCACAGTAATGCGAGGAGTTCGGATTAAAAACCATTCTTGCATTTCCAGCAGTATCATTGGCTGGCATTCCACTGTTGGACAATGGGCTCGCGTGGAGAACATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAATTTACAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAGCATTCTGAAGCCAGAGATAGTCATGTGA 990 0.4404 MILHQIEALKAIGVSEVVLAINYQPEVMLNFLKDFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEETTGQVEKFVEKPKVFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPKIASEKKLYAMVLPGFWMDIGQPKDYVSGLRLYLNSLRKKSPSMLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCIIESGVRLSCCTVMRGVRIKNHSCISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSSILKPEIVM* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03570 329 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 280 IPR029044 -
Rops11g03570 329 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 201 IPR029044 -
Rops11g03570 329 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 328 - -
Rops11g03570 329 Pfam Nucleotidyl transferase 1 197 IPR005835 GO:0009058
Rops11g03570 329 Gene3D Hexapeptide repeat proteins 204 324 - -
Rops11g03570 329 CDD M1P_guanylylT_B_like_N 1 202 IPR045233 GO:0004475|GO:0005525|GO:0009298
Rops11g03570 329 FunFam mannose-1-phosphate guanyltransferase beta 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03570 Rops-Chr11 68130663 68135208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03570 K00966 - gmx:100818016 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03570 11 68130663 68135208 Rops11g03570 11 68130663 68135208 ECH
Rops11g03570 11 68130663 68135208 Rops9g00926 9 15028903 15032511 PCT