Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03569 ATGACTGTAAACATGTTACCTTTAACGGAGTCATCAACGGCGAGGCTCCTCCTCATAGCGGCGTCGCTGCTGCTAACATGCGCCGTTCACGTGATGTCAGTGAATCCATGTGCACCGTGTGGCAACACCACGGTGCCGTTCCCTCTCAGCACCGCCGCCACGTGCGGCGACCCGACCTACAAAATCCGGTGCAGCTCCACCGGAACACTCACGTTCGACACGTTGAACAACTCGTACACGATCGAATCAATCAACCCGAAAACCCAACGGTTTGTGATCCGACCCGCTCCGATCATAGCCGACACGTGCGTCTCCACCGATAAGGTTCACCAAGGGATTCAACTCAACAACACGCTCCCTTTCAACATCACAAGCTCCAACACCATCGTTTACCTTAACTGTACCCGAACGCTTCTTCAATCGCCGTTGAATTGCTCCTCCGCTAGTATCTGTCACAGTTACATCAACGCCACCGCTTCCGTCGCCGCGTGTCAAAGCGGACCACTCTGTTGCACCTACCGAACTGGCGGGTCAAGTAACTCTTACATGATTCGGGTCAGAGATTCGGGTTGTAGTGCTTATTCTAGCTTTGTGAATCTCGATCAGGGTTTACCCGTGAATCGTTGGCCCCGACCCGGTTTGGAGATTCAGTGGGTTTCGCCAAGAGAAACTGTTTGTGGGTCCCAGAGTGATTGTGATGCTGCCACTTCAACTTGTGGGCCTGACACGTCATCTTCTAATGGGATCAAGCGGTGTTTTTGTAATAGTGGGCTTGTGTGGGACCCTATTAATGGGGTGTGTACTGAAAAAATTACTTGCCAGGATCCAGATGGTTGTGACGACTCAAGTAAAACGGCATTAATAGCAGGTTTAACATGCGGGATTGGAGGTGCACTCATCATTGCCAGTGCCACCATTGCTGTTTTGCTCTACAAACGCCACAAACGCATCAAAGAAGCACGAGAACGGCTAGCCAAAGAGCGTGAAGGAATTCTGAATTCGAGTGCTGGTGGCAGAGCTGCTAAACTTTTCTCTGGCAAAGAGATAAAGAAAGCTACTAATGACCTTTCCAGTGATCGTCTTCTTGGTGTTGGTGGATATGGTGAAGTGTACAAGGGCATTCTTCAAGATGGCACTGTTGTTGCTGTCAAGTGTGCTAAGCTTGGAAACCACAAAGGCACTGATCAAATCCTCAATGAGGTTCGCATATTATGCCAAGTCAACCACCGAAACCTTGTTGGTCTACTTGGTTGCTGTGTGGAATTGGAGCAACCTATTATGGTTTATGAGTTCATAGAAAATGGTACCCTTCTTGATCATTTGCAAGGTGAAATGCCTGAAGGCCGTGCCTCACTTACATGGAATCATCGCCTTATCATCGCACGTGACACAGCTGAAGTTTATGTGCAGAGATTGGTGGAGGAAGAAAAGTTGATGGATGCCATTGATCCAATGTTGAAGAATGGAGCTACTGCTATAGAACTGGAGACAATGAAGGCATTGGCATTTCTTGCATTGGGGTGCTTAGAGGAGAGGAGGCAGAACAGACCTTCAATGAAAGAGGTAGCAGAGGAGATCGAGTATATCATTAGTATTGCCTCTGCAAAGGAGGTGGAGAATTAG 1623 0.4861 MTVNMLPLTESSTARLLLIAASLLLTCAVHVMSVNPCAPCGNTTVPFPLSTAATCGDPTYKIRCSSTGTLTFDTLNNSYTIESINPKTQRFVIRPAPIIADTCVSTDKVHQGIQLNNTLPFNITSSNTIVYLNCTRTLLQSPLNCSSASICHSYINATASVAACQSGPLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLDQGLPVNRWPRPGLEIQWVSPRETVCGSQSDCDAATSTCGPDTSSSNGIKRCFCNSGLVWDPINGVCTEKITCQDPDGCDDSSKTALIAGLTCGIGGALIIASATIAVLLYKRHKRIKEARERLAKEREGILNSSAGGRAAKLFSGKEIKKATNDLSSDRLLGVGGYGEVYKGILQDGTVVAVKCAKLGNHKGTDQILNEVRILCQVNHRNLVGLLGCCVELEQPIMVYEFIENGTLLDHLQGEMPEGRASLTWNHRLIIARDTAEVYVQRLVEEEKLMDAIDPMLKNGATAIELETMKALAFLALGCLEERRQNRPSMKEVAEEIEYIISIASAKEVEN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03569 540 Pfam Wall-associated receptor kinase galacturonan-binding 39 93 IPR025287 GO:0030247
Rops11g03569 540 ProSiteProfiles Protein kinase domain profile. 356 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03569 540 Coils Coil 532 540 - -
Rops11g03569 540 SUPERFAMILY Protein kinase-like (PK-like) 339 466 IPR011009 -
Rops11g03569 540 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Rops11g03569 540 FunFam Wall-associated receptor kinase-like 20 318 431 - -
Rops11g03569 540 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 35 466 IPR044652 GO:0004672
Rops11g03569 540 Gene3D Transferase(Phosphotransferase) domain 1 468 539 - -
Rops11g03569 540 Pfam Protein tyrosine and serine/threonine kinase 358 465 IPR001245 GO:0004672|GO:0006468
Rops11g03569 540 Gene3D Transferase(Phosphotransferase) domain 1 339 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03569 Rops-Chr11 68124309 68127845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03569 467 539 Receptor kinase-like Gene Family AT5G02070 52.055 4.46e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops11g03569 PK_Tyr_Ser-Thr 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03569 - - gmx:100305415 754.592