Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03562 ATGGCTGGTATGTGTTGTGGTGTTGTTGGAGAAGGTGAGGCTCCGGGGGCGAGTTCACGCCCTTCACGGCGCCGGAGTTTGGATCTTCTCTCTTTCAAATATTTAGCTGACGTGGCAGTTCCACCGCCGATGGGGACTTCCTTCAAACGACAGAAGCTGGATCTCCCTGCTCCAAGGGATTGCCAAAACGCGGTTCAGAATTATGAAAAATCAAACGTAAACGACGATGTCGTTTCGGAAACCAAACATTCTCCTACTGAAACTGAAGCTGGTTCGGAAGTTGAGGAAGAGCGTCCAAAGTTTGGTATTACCTCCGTTTGTGGTAGAAGGAGAGACATGGAAGATTCGGTTTCGGTTCGTCCTTTGTTCTCTGAAGAACGTTTTCACTACTTCGGAGTTTTCGATGGTCACGGTTGCTCTCATGTTGCTACTATGTGCAAGGAGAGGCTTCATGAGATTGTGAAGGAAGAGATTCATGAAGCAAAAGAGAATTTGGAATGGAAATCAACGATGAAACAAGGTTTTGCTCGCATGGACGATGAAGTTCTAAAATGGAACCAAAGTAAGCAAACCTTTACTTGTAGATGCGAGCTTCAAACTCCTCACTGTGACGCCGTCGGATCCACCGCCGTCGTCGCCGTCCTGACACCGGACAAGCTCATCGTCTCCAACTGCGGCGACTCACGAGCCGTCCTTTGCCGGAAAGGCGTCGCCATCCCCCTCTCCTCCGATCACAAGCCTGACCGACCCGACGAATTGCTTCGGGTTCAAGCCGCAGGTGGTCGCGTGATCTATTGGGATGGTCCAAGAGTGCTTGGGGTGTTGGCTATGTCAAGAGCCATAGGTGACAACTATTTGAAGCCATACGTGATTTCGGAGCCTGAGGTTACGATAACGGAACGGAATGACGAGGATGAGTGTTTGATAATAGCGAGTGATGGGCTTTGGGACGTGGTGTCAAACGACACCGCATGTGGGGTGGTTAGGATGTGTCTGAAAGCACAGAAGCCACCGTCGCCGCCGGGGTCTCCCGGTAATGACGTGGCGGCGGATGGTTCCGACAGGGCATGTTCCGATGCGTCAATTCTGTTGACCAAGTTGGCTTTGGCGAGGCATAGTTCGGATAACGTGAGCGTGGTGGTGGTTGATTTAAGGAGAGATCAACGACAATCGTCGAATTCCAACAACAAAAACAACGTTAATTAA 1206 0.505 MAGMCCGVVGEGEAPGASSRPSRRRSLDLLSFKYLADVAVPPPMGTSFKRQKLDLPAPRDCQNAVQNYEKSNVNDDVVSETKHSPTETEAGSEVEEERPKFGITSVCGRRRDMEDSVSVRPLFSEERFHYFGVFDGHGCSHVATMCKERLHEIVKEEIHEAKENLEWKSTMKQGFARMDDEVLKWNQSKQTFTCRCELQTPHCDAVGSTAVVAVLTPDKLIVSNCGDSRAVLCRKGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTITERNDEDECLIIASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPGNDVAADGSDRACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQSSNSNNKNNVN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03562 401 ProSiteProfiles PPM-type phosphatase domain profile. 100 384 IPR001932 -
Rops11g03562 401 SMART PP2C_SIG_2 114 384 IPR001932 -
Rops11g03562 401 SMART PP2C_4 88 382 IPR001932 -
Rops11g03562 401 PANTHER PROTEIN PHOSPHATASE 85 384 IPR015655 GO:0004722|GO:0006470
Rops11g03562 401 CDD PP2Cc 100 333 IPR001932 -
Rops11g03562 401 FunFam Protein phosphatase 2C 37 95 391 - -
Rops11g03562 401 Gene3D - 95 394 IPR036457 -
Rops11g03562 401 MobiDBLite consensus disorder prediction 73 98 - -
Rops11g03562 401 Pfam Protein phosphatase 2C 101 376 IPR001932 -
Rops11g03562 401 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Rops11g03562 401 MobiDBLite consensus disorder prediction 75 98 - -
Rops11g03562 401 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g03562 401 SUPERFAMILY PP2C-like 98 385 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03562 Rops-Chr11 68062983 68064940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03562 71 390 PP2C-type Phosphatase Gene Family AT1G07430 58.857 4.95e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03562 K14497 - gmx:100776356 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03562 11 68062983 68064940 Rops9g00931 9 15107170 15109305 ECH
Rops11g03562 11 68062983 68064940 Rops11g03562 11 68062983 68064940 ECH
Rops11g03562 11 68062983 68064940 Rops9g00931 9 15107170 15109305 PCT