Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03519 ATGCTTGATGATATGCATTCACAGCACTTTTCAGGACTTGGTGTCATAATATATCACTCTAAAGATATGAGATTAGTAGCTATTGACAAGAATACAGTTGTAATATCTGTCTCTGATGTGATGCTATCTTTTGCTGCTTCCCCAGTTGAAATTCCAAGAGAGGACCTGCTGGTGCTGCAATTCGTGCTGCAGAGTTACTTCCAGCTGAATTTTGGTTTCGGTACATCAGAAGATCATCGTCAATTTGTTAGTGTCATTCCGATTTATGCAATAAGTCAGGTCCTTGACAAGATTGTATCTGGTGCGAATGGGCCACCTCTTCTTATAAATGGTGTCAAAAGGCCTATGCCTCTTGTGAGAATTTTAGAGGTTGAACTTTATCCAACAGTACTTTCTACGGCTCGGAGTTTTGGACTGAGTAATGACTGGATTCTGGCGCTTTTTAATAAAGACACAATAAGACGACAAGTTTTATGTGTTAAAGGTTGTTTGGTTGGATCAAAGGCTGAGAATCTTTTAGAGCAAGGGGACATGGTTTTAGCAATCAATAAAGAACCAGTCACATGCTTCCTTGACATTGAAAATGCTTGCCAAGCTTTAAACAAGTCTCATACCAATGATGGAAAGCTTCAGATGACTATTTTTCGACAAGGTCAAGAGGTTGAACTTCTTGTAGGAACAGATGTTAGGGACGGAAATGGCACAACTCGTGCAAATAATTGGTGTGGTTGTATTGTTCAAGTTCCACATCCAGCAATTTGCAACCACTGTTTGTTTACCAGTTACCAAAAGGCCAACAAGGAAACATCAGGGAATGGATCAGATTTCAGTAGCAGTAACAGTGGTCATCGTGGCCTTCCCATGATCCAAACCCACAGTAGTAAGGAAGTGTGCCACGACGACAGCACCACACCGTTGAAAGCTCAAACCATTCAGGAACTCCATTCTCTGCAGAAGAAAAAGTCAACCCCTTCCACTCCCATCAGAACAACAACACAATGTGGTAGTGGTAGTCCCTTTGCCAGTATTTCTGAAGAAGAACGCCAACGCCAGCAACTTCAATCCATCAGTGCATCGTTGGCGTCGTTGACGAGGGAGACAGGGCCTAAGGTGGTGAAAGGAGACCCAGCCACCAAGGCAGATAATGTGACACACGTGGATCACTCACATTTGCAAAAAGATGCTGATTTTGATCGAGTTACAGAAATTCATAATGAGTTTCTTCAATCCTATTTGGGAAGTTATGAGAAAGCAAAAGAGGCCATGATATATTCTTCCACAAGGAATATCAATGGCTTTGCTGGAACCCTAGAAGAGGAAGAGGCTGCTGACATTGCAGAACATCCAAACGTTGTGTCAGTGTTTTTAAACCGAGGAAGAAAATTACACACTACACATTCATGGGAATTCATGTCACTGGAACAAAATGGTGTAGTTCCATCTGATTCCCTGTTTAGAAATGTCAGATTTGGTGAAGATACTATTATTGGGAATCTTGACACTGGTGTATGGCCTGAATCTCCGAGCTTTAGAGATGAGGAGATAGGACCCATTCCTTCAAGGTGGAAAGGAACTTGTCAGAGTGATATCACAGGCTTTCGTTGCAACAGCTTTGGTATTACCAGTTGCAACGACAACAGTTGA 1644 0.4209 MLDDMHSQHFSGLGVIIYHSKDMRLVAIDKNTVVISVSDVMLSFAASPVEIPREDLLVLQFVLQSYFQLNFGFGTSEDHRQFVSVIPIYAISQVLDKIVSGANGPPLLINGVKRPMPLVRILEVELYPTVLSTARSFGLSNDWILALFNKDTIRRQVLCVKGCLVGSKAENLLEQGDMVLAINKEPVTCFLDIENACQALNKSHTNDGKLQMTIFRQGQEVELLVGTDVRDGNGTTRANNWCGCIVQVPHPAICNHCLFTSYQKANKETSGNGSDFSSSNSGHRGLPMIQTHSSKEVCHDDSTTPLKAQTIQELHSLQKKKSTPSTPIRTTTQCGSGSPFASISEEERQRQQLQSISASLASLTRETGPKVVKGDPATKADNVTHVDHSHLQKDADFDRVTEIHNEFLQSYLGSYEKAKEAMIYSSTRNINGFAGTLEEEEAADIAEHPNVVSVFLNRGRKLHTTHSWEFMSLEQNGVVPSDSLFRNVRFGEDTIIGNLDTGVWPESPSFRDEEIGPIPSRWKGTCQSDITGFRCNSFGITSCNDNS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03519 547 MobiDBLite consensus disorder prediction 314 342 - -
Rops11g03519 547 Pfam Peptidase inhibitor I9 391 463 IPR010259 -
Rops11g03519 547 SUPERFAMILY PDZ domain-like 160 257 IPR036034 GO:0005515
Rops11g03519 547 MobiDBLite consensus disorder prediction 364 387 - -
Rops11g03519 547 SUPERFAMILY Subtilisin-like 390 512 IPR036852 GO:0004252|GO:0006508
Rops11g03519 547 Gene3D - 127 231 IPR036034 GO:0005515
Rops11g03519 547 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 372 463 IPR037045 -
Rops11g03519 547 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 1 53 - -
Rops11g03519 547 Coils Coil 346 366 - -
Rops11g03519 547 Gene3D Peptidase S8/S53 domain 464 547 IPR036852 GO:0004252|GO:0006508
Rops11g03519 547 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03519 Rops-Chr11 67261028 67273936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03519 388 536 Subtilisin-like Serine Gene Family AT2G04160 59.740 2.14e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03519 K22686 - gmx:100777219 311.612