Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g03512 | ATGGGTTTCTCCCAAAAAACCTGCACTGATTCCAGGGACATTTCCAATGCTCAAAGTGTTCCTTCACATGCTTCTTCTTCTGTAGTTGCAGGTCACTATTGTGACTACAACAAGCTTAAATTTCGAAGCTTTTTGAGAAAAATGATCTGGGAATTTGGTTTTGTATGTGTTTCTGACCCTTCCCGAAGACGGGGTAGCTCTGAGAGAAACAAGGGTCATGGCCAAAATGATGACAATGGCCACAAGAAGATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCAGAGTCTGGTGGGTGTGGAGCAGAATTGACCAATGCTGACCCTCAATCGGTTCACTCTTCTTTCAGGTTCAGTTTCTGTTCTCAGGTTGAGTTAGAGTCCTTGAACATGAGTTCTTCCACTGCTGCAACCGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAATCTCGTGCCAGGGAGATGAAATGGAGGAGAATTGAGTCATTGGAGAAAAGCATATCACCTGTTGCTCACTCTTTGATTAGGTTCAGCTTTGGTGAAATTCTGTCAGCTACTCGGAATTTCTCCAAAGGTAGGGTGTTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAGTTGGGCTTTTGAGGACCGCTGTAGCAATTAAACAGTTGGACAAGGAAGACAAGGAATCTGCCAAAGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCTAATGTTGTTCCCCTTGTTGGTTTTTGTATTGACCCGGAAGAGGGTTTGTTTTTGGTCTACAAGTATGTCTCAGGAGGCAGCTTGGAGCGCCACTTGCATGGGAGGAAAAAAGGTGTGAAGGGTAATTCACCTCTTCCATGGTCGGTGAGGTACAAAGTTGCAATTGGAATTGCTGAAGCTGTTGCTTATCTGCATGGTGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAGGAAGACTCCCAAGCTTTGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCGGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGACAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATTACTGGCCGGAAGCCAATTGAAGCGAAAAGGTCTCCAGGAGAGGAGAATTTGGTCTTATGGGCCAAACCTTTTCTCCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTCAAGTGCAATTTGAGATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGTCTGTGTCACAAATGAAGAATCTAGGAGACCTGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAATCTGTTCTCTCTAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGATGTGTGATTGATTGCTATTCACAATTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTCTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTCTATGATCGTTAA | 1590 | 0.4296 | MGFSQKTCTDSRDISNAQSVPSHASSSVVAGHYCDYNKLKFRSFLRKMIWEFGFVCVSDPSRRRGSSERNKGHGQNDDNGHKKMSLEHNKAWLLAESGGCGAELTNADPQSVHSSFRFSFCSQVELESLNMSSSTAATVLMVNLDNGVSESRAREMKWRRIESLEKSISPVAHSLIRFSFGEILSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKQLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGVKGNSPLPWSVRYKVAIGIAEAVAYLHGGTERCVVHRDIKPSNILLSSRKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRSPGEENLVLWAKPFLQKGKGAIEELLDPQLKCNLRFSNQMGRMIEAAAVCVTNEESRRPGIHEIIAILKGEEESVLSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYDR* | 530 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g03512 | 529 | Pfam | Protein kinase domain | 191 | 467 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops11g03512 | 529 | ProSiteProfiles | Protein kinase domain profile. | 190 | 478 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops11g03512 | 529 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Rops11g03512 | 529 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 317 | 329 | IPR008271 | GO:0004672|GO:0006468 | |
Rops11g03512 | 529 | SUPERFAMILY | Protein kinase-like (PK-like) | 177 | 473 | IPR011009 | - | |
Rops11g03512 | 529 | MobiDBLite | consensus disorder prediction | 62 | 82 | - | - | |
Rops11g03512 | 529 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 488 | - | - | |
Rops11g03512 | 529 | PANTHER | OS08G0249100 PROTEIN | 121 | 487 | IPR046958 | - | |
Rops11g03512 | 529 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 267 | - | - | |
Rops11g03512 | 529 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Rops11g03512 | 529 | SMART | serkin_6 | 190 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops11g03512 | 529 | FunFam | probable serine/threonine-protein kinase PBL7 | 151 | 267 | - | - | |
Rops11g03512 | 529 | FunFam | Putative receptor-like serine/threonine-protein kinase | 268 | 486 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g03512 | Rops-Chr11 | 67142388 | 67145485 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g03512 | 178 | 473 | Trihelix Transcription Factor Family | AT1G70460 | 42.282 | 4.03e-67 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Rops11g03512 | Pkinase | 1.3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g03512 | - | - | gmx:100786826 | 914.45 |