Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03512 ATGGGTTTCTCCCAAAAAACCTGCACTGATTCCAGGGACATTTCCAATGCTCAAAGTGTTCCTTCACATGCTTCTTCTTCTGTAGTTGCAGGTCACTATTGTGACTACAACAAGCTTAAATTTCGAAGCTTTTTGAGAAAAATGATCTGGGAATTTGGTTTTGTATGTGTTTCTGACCCTTCCCGAAGACGGGGTAGCTCTGAGAGAAACAAGGGTCATGGCCAAAATGATGACAATGGCCACAAGAAGATGAGTTTGGAGCACAACAAGGCTTGGTTGCTTGCAGAGTCTGGTGGGTGTGGAGCAGAATTGACCAATGCTGACCCTCAATCGGTTCACTCTTCTTTCAGGTTCAGTTTCTGTTCTCAGGTTGAGTTAGAGTCCTTGAACATGAGTTCTTCCACTGCTGCAACCGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAATCTCGTGCCAGGGAGATGAAATGGAGGAGAATTGAGTCATTGGAGAAAAGCATATCACCTGTTGCTCACTCTTTGATTAGGTTCAGCTTTGGTGAAATTCTGTCAGCTACTCGGAATTTCTCCAAAGGTAGGGTGTTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAGAGTTGGGCTTTTGAGGACCGCTGTAGCAATTAAACAGTTGGACAAGGAAGACAAGGAATCTGCCAAAGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCTAATGTTGTTCCCCTTGTTGGTTTTTGTATTGACCCGGAAGAGGGTTTGTTTTTGGTCTACAAGTATGTCTCAGGAGGCAGCTTGGAGCGCCACTTGCATGGGAGGAAAAAAGGTGTGAAGGGTAATTCACCTCTTCCATGGTCGGTGAGGTACAAAGTTGCAATTGGAATTGCTGAAGCTGTTGCTTATCTGCATGGTGGAACTGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCTAGGAAGACTCCCAAGCTTTGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCGGTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGACAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATTACTGGCCGGAAGCCAATTGAAGCGAAAAGGTCTCCAGGAGAGGAGAATTTGGTCTTATGGGCCAAACCTTTTCTCCAGAAGGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTCAAGTGCAATTTGAGATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGCTGTCTGTGTCACAAATGAAGAATCTAGGAGACCTGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAATCTGTTCTCTCTAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGATGTGTGATTGATTGCTATTCACAATTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTCTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGATTATCTCTATGATCGTTAA 1590 0.4296 MGFSQKTCTDSRDISNAQSVPSHASSSVVAGHYCDYNKLKFRSFLRKMIWEFGFVCVSDPSRRRGSSERNKGHGQNDDNGHKKMSLEHNKAWLLAESGGCGAELTNADPQSVHSSFRFSFCSQVELESLNMSSSTAATVLMVNLDNGVSESRAREMKWRRIESLEKSISPVAHSLIRFSFGEILSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKQLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGVKGNSPLPWSVRYKVAIGIAEAVAYLHGGTERCVVHRDIKPSNILLSSRKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRSPGEENLVLWAKPFLQKGKGAIEELLDPQLKCNLRFSNQMGRMIEAAAVCVTNEESRRPGIHEIIAILKGEEESVLSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDDDYLYDR* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03512 529 Pfam Protein kinase domain 191 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03512 529 ProSiteProfiles Protein kinase domain profile. 190 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03512 529 MobiDBLite consensus disorder prediction 1 21 - -
Rops11g03512 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Rops11g03512 529 SUPERFAMILY Protein kinase-like (PK-like) 177 473 IPR011009 -
Rops11g03512 529 MobiDBLite consensus disorder prediction 62 82 - -
Rops11g03512 529 Gene3D Transferase(Phosphotransferase) domain 1 268 488 - -
Rops11g03512 529 PANTHER OS08G0249100 PROTEIN 121 487 IPR046958 -
Rops11g03512 529 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Rops11g03512 529 MobiDBLite consensus disorder prediction 60 82 - -
Rops11g03512 529 SMART serkin_6 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03512 529 FunFam probable serine/threonine-protein kinase PBL7 151 267 - -
Rops11g03512 529 FunFam Putative receptor-like serine/threonine-protein kinase 268 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03512 Rops-Chr11 67142388 67145485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03512 178 473 Trihelix Transcription Factor Family AT1G70460 42.282 4.03e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Rops11g03512 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03512 - - gmx:100786826 914.45