Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03504 ATGTCCACCACTGTCAGATTTCAAGTTCCCGCGTGCGCCTTGTCCGCCACCGTCAACAACCTTCGTCTCCGCCCCAACGCCGTCGTTTCATCCAACCATTGCAGTTTCAGACCCATCAGGAAGCCTCTCAGAGTCTCAATGTCTTCAGTTCCTCCTTCAGAACCCTTGGAAGTCATCGTTAAAGCTTCTATCACCACACCCAACACCTTTGGAGACTGCCCTTTTAGCCAAAGGGTATTGCTGACACTGGAGGAAAAACATATACCTTATGACCTGAAGTTTGTGGATTTGGCCAACAAGCCAGAATGGTTCCTTAAAATCTATCCTGAAGGTAAAGTTCCTGTGATAAAGATTGATGAGAAGTGGGTTCCTGATTCAGATGTTATCACACAAACATTGGAAGAGAAGTATCCCAGCCCACCCTTGGTGACCCCACCCGAAAAGGCTACAGCTGGGTCTAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAAGACCCCAATGATGGAACTGAGCAAGCATTACTAAATGAACTGAGTTCTTTCAATGATTACCTCAAGGAAAATGGTCCTTTTATCAATGGGAAAGACATATCTGCAGCAGACCTGTCACTTGGACCAAAGCTATATCATTTGGAGATTGTTCTGGGGCATTATAAGAAATGGACAGTACCTGATTCACTGACCTTTTTGAAGTCTTATATGAAGGCTATTTTCTCAAGGGAATCATTCATTAAAACACGTGCAAAACCACAGGATGTCATCGAAGGTTGGCGTCCAAAAGTGGAGGGCTGA 798 0.4436 MSTTVRFQVPACALSATVNNLRLRPNAVVSSNHCSFRPIRKPLRVSMSSVPPSEPLEVIVKASITTPNTFGDCPFSQRVLLTLEEKHIPYDLKFVDLANKPEWFLKIYPEGKVPVIKIDEKWVPDSDVITQTLEEKYPSPPLVTPPEKATAGSKIFSTFIGFLKSKDPNDGTEQALLNELSSFNDYLKENGPFINGKDISAADLSLGPKLYHLEIVLGHYKKWTVPDSLTFLKSYMKAIFSRESFIKTRAKPQDVIEGWRPKVEG* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03504 265 SFLD Main (cytGST) 71 238 - -
Rops11g03504 265 SUPERFAMILY GST C-terminal domain-like 136 262 IPR036282 -
Rops11g03504 265 CDD GST_N_family 69 134 - -
Rops11g03504 265 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 55 262 IPR044627 GO:0033355|GO:0045174|GO:0098869
Rops11g03504 265 FunFam Glutathione S-transferase DHAR3 chloroplastic 54 142 - -
Rops11g03504 265 SUPERFAMILY Thioredoxin-like 69 139 IPR036249 -
Rops11g03504 265 Gene3D Glutaredoxin 55 142 - -
Rops11g03504 265 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 63 141 IPR004045 -
Rops11g03504 265 SFLD Glutathione Transferase (cytosolic) 71 238 IPR040079 -
Rops11g03504 265 Pfam Glutathione S-transferase, N-terminal domain 72 141 IPR004045 -
Rops11g03504 265 Gene3D - 143 265 - -
Rops11g03504 265 FunFam Glutathione S-transferase DHAR3, chloroplastic 143 265 - -
Rops11g03504 265 CDD GST_C_DHAR 142 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03504 Rops-Chr11 67031401 67035850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03504 4 265 Glutathione S-transferase Gene Family AT5G16710 66.667 2.18e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03504 K21888 - gmx:732557 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03504 11 67031401 67035850 Rops11g03504 11 67031401 67035850 ECH