Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03503 ATGGACTCCACCCCTCTCCAATCAGCTTCCAATTCCAAGCTCCCAATCAAACGCAAAACCCTTCCCTCCCTTTTTCCCCACCCTGACCCGAACCCTAATCTCTCTCCACCACCACCCCCTTTCAAATTCCACCGAATTTGGACCGAAACCGATGAAATCCAATTCCTAGAAGGCCTCCTCCACTCCAACCTCGTCTTCCCCAAAGATCTCCCCCTCTTCTACCACCGTTTCTCCACCACCATGTCCCACCCTTACTCCCACTCCCAACTCTCCGAGAAGCTCCGCCGCCTCCGCAAGAAATTCCGATCACTCTCCTCCCGCCTCCTCCGTCGTGGCCCCGCCGCACTCTCTCCCCACGATCACGCCCTCTATCGCCTCTCCGAGAAGCTCTGGAGCCCCCAATTCGCTTCCACTTCACCCTTCGGAAACTCCAACGTTGCCAAGGTCGAGGTGGAAGAGGTTGTCGGTGTGAACGCTAATCGGAAAAATGGGGATATGGGTTTTGGTTGTGGTAACGAGAAAATAAGTGGGGTGGCTTCAAAAATTGTTCTTGATGTGTTTGATCAGTGTGTGAAAGAAGCCAATGTGGGTCTTTTATGGCAAGGGGTTCTCTGTTATGATCGAAAGGCTTCTTCTCAGAATTTCGGGAGGCGGTGGCAGGAACAGATAGCGTTGGAATTTGAAGTGTTTGCTAAACGATTGAGATTGGTAATGGAGGATTCTCTTAATCAACACTCACCCAATTTGTAA 750 0.5133 MDSTPLQSASNSKLPIKRKTLPSLFPHPDPNPNLSPPPPPFKFHRIWTETDEIQFLEGLLHSNLVFPKDLPLFYHRFSTTMSHPYSHSQLSEKLRRLRKKFRSLSSRLLRRGPAALSPHDHALYRLSEKLWSPQFASTSPFGNSNVAKVEVEEVVGVNANRKNGDMGFGCGNEKISGVASKIVLDVFDQCVKEANVGLLWQGVLCYDRKASSQNFGRRWQEQIALEFEVFAKRLRLVMEDSLNQHSPNL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03503 249 Coils Coil 87 107 - -
Rops11g03503 249 PANTHER BNAANNG10740D PROTEIN-RELATED 9 239 IPR007592 GO:0006355
Rops11g03503 249 MobiDBLite consensus disorder prediction 1 39 - -
Rops11g03503 249 Pfam Protein of unknown function, DUF573 43 132 IPR007592 GO:0006355
Rops11g03503 249 MobiDBLite consensus disorder prediction 1 17 - -
Rops11g03503 249 MobiDBLite consensus disorder prediction 25 39 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03503 43 168 GeBP Transcription Factor Family AT5G28040 35.075 5.89e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Rops11g03503 DUF573 1.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03503 - - lang:109345125 199.519