Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03488 ATGGCCAAAACGAAAACGAGCCTCTCCCTCTCAATCTTCACCACCATCATTGTTCATTCTCTTTCTTCTTCCTCCACGGACATATTCCTCTACGGCGGGTGCACACAACAAAGGTACACCCCTAACTCGCCCTACGAGTTAAACCTCAACTCGCTACTCACCTCACTGGTCAACTCAGCAACCTACTCATCCTACAACAACTTCACCGTCGTCGGTTCCAGCCCCAACGACGTCGTCTACGGCCTCTACCAGTGCCGCGGTGACCTATCAATGCCGGACTGCGCCACATGCGTGGCACGTGCCATCTCACGCGCCGGTGACATATGTCCGGTGACGTGCGGCGGCGTCGTCCAGCTCGAAGGTTGCTACGTGAAGTATGATAATGCTACGTTCTTGGGTGTGGAGGATAAGACGGTGGTGCTGAAAAAATGTGGGCCCTCAATCGGGTATGACCCGGGTGAGAAGGATGCGGTTTTATCCGGGTTGTCGGGTTCGGGTGGGTATTTTCGGGTTGGAGGGTCGGGTCAGTTGAAGGGGTTGGCTCAGTGCACTGGGGACTTGAGTTTCATGGAGTGTCAAGATTGTGTCGGGGAAGCGATCCGACGGCTGAGGAGTGATTGCGCCGCCGCAGATCACGGGGACATGTTCTTGGGAAAGTGTTATGCCAGGTACTCCACTGGTGGGGCCCAAGCCCATGCTTACCCCCAGGCCCATGCAGGTAAATCGAACAATGAAGGTGAGAAGACATTTGCTATAATTATTGGATTATTAGCAGGTGTAGCTTTACTTATTATTTTCCTTGCTTTCTTGAGGAGGATTTGTGAGGGACAAGGTAAATAA 840 0.5274 MAKTKTSLSLSIFTTIIVHSLSSSSTDIFLYGGCTQQRYTPNSPYELNLNSLLTSLVNSATYSSYNNFTVVGSSPNDVVYGLYQCRGDLSMPDCATCVARAISRAGDICPVTCGGVVQLEGCYVKYDNATFLGVEDKTVVLKKCGPSIGYDPGEKDAVLSGLSGSGGYFRVGGSGQLKGLAQCTGDLSFMECQDCVGEAIRRLRSDCAAADHGDMFLGKCYARYSTGGAQAHAYPQAHAGKSNNEGEKTFAIIIGLLAGVALLIIFLAFLRRICEGQGK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03488 279 Gene3D - 156 227 IPR038408 -
Rops11g03488 279 Gene3D - 26 131 IPR038408 -
Rops11g03488 279 Pfam Salt stress response/antifungal 174 226 IPR002902 -
Rops11g03488 279 Pfam Salt stress response/antifungal 34 128 IPR002902 -
Rops11g03488 279 ProSiteProfiles Gnk2-homologous domain profile. 132 229 IPR002902 -
Rops11g03488 279 FunFam cysteine-rich repeat secretory protein 3 26 131 - -
Rops11g03488 279 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Rops11g03488 279 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03488 Rops-Chr11 66783488 66785407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03488 8 225 Pollen Coat Proteome AT4G20670 25.726 1.72e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03488 - - gmx:100811615 408.297