Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03474 ATGGCTCCGACCTGTCTCTCCTTCTTCCTCTTCTTCTTCTCGTGCATCTCTGGACCTTGTTGCAGTCAACTATGGAGGCAACCGAGGAAAACAATACCAATGAGGGTAATGCAGTGCACACTGGTGTTTCTCAACAAAATGCATTTCCTTTCTATAATGGATACATTTGGTCCTAACGAAGAGCAAGTGGATAAAGCCAGCAAGCCAACGTGGCTTGAGGATTTTATGAGCAAAACTTTCTTTGACCAATGTACAGCTCATCCTTTACAGAGGAATGAGTTAAACAAGTACTGTATAAACTGCAATCGGTCAGTTTGCCATTATTGTGCATTATCATGTACTCGTTGCCAACACAAGATACTTCAAATCTATAGACACAGTTACAAAGAGGTTATCACCCTTGCTGCTATGGAAAAGCATATAGACTGCTCACAAATTCAGCCCTACAAACGCAATTCACATGTGGTTATTTTTCTGCGACCTCTTCCACACACTGATTCAGCCAAAAAGAATGAGGCATCATCATGTGACATTTGCAGCAGAAGGTTGGCTGAGCCTGATTTATATCGCTACTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTCAAGGAAGACTAATGATTCAGTTCCTCCCTTCATTTCCATTCAGACTAGTCTTCATCAGGAGAAAAAGGAGGAAACTACTGAACCCTCAAAGCGGCGTAGGAAAAGAAAGGGAACACCTCACAGAGCTCCATTCTTCTAA 744 0.4234 MAPTCLSFFLFFFSCISGPCCSQLWRQPRKTIPMRVMQCTLVFLNKMHFLSIMDTFGPNEEQVDKASKPTWLEDFMSKTFFDQCTAHPLQRNELNKYCINCNRSVCHYCALSCTRCQHKILQIYRHSYKEVITLAAMEKHIDCSQIQPYKRNSHVVIFLRPLPHTDSAKKNEASSCDICSRRLAEPDLYRYCSISCKVKAVSRKTNDSVPPFISIQTSLHQEKKEETTEPSKRRRKRKGTPHRAPFF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03474 247 ProSiteProfiles Zinc finger B-box type profile. 84 131 IPR000315 GO:0008270
Rops11g03474 247 Pfam PLATZ transcription factor 125 198 IPR006734 -
Rops11g03474 247 MobiDBLite consensus disorder prediction 212 247 - -
Rops11g03474 247 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 63 246 - -
Rops11g03474 247 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03474 Rops-Chr11 66595207 66599135 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops11g03474 PLATZ 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03474 - - tcc:18601328 243.432