Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03471 ATGAGTGCTTCTTCATCCAAAAAAAGGGGCAAGGAAGAGCAAGTGGATAAAGCTAGCAAGCCAAAGTGGCTTGAGGATTTTCTGAGCAAAACTTTCTTTGACCATTGCACAGCTCATCCTTTACATAGGAATGAGTTAAACAAATATTGTGTAAACTGCAATCAGTCAGTTTGCCAACATTGTGCATCATCATGTACTCATCACCAGCACAAGATACTTCAAATCTATAGACACAGTTTCAAAGATGTTGTCTCCCTTGCTGCTATGGAAAAGCATATTGACTGCTCACAAATTCAGCCCTACAAATGCAATACGCATTTGGTTGTTTCTCTGAAGCCTCTTCCACACTTTGGTTCAGGAAAAAAGAATGAGGCATCATCATGTGAAATCTGCAGTAGAAGGTTGGCTGAGCCTAATTTATATCGCTTCTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTCAAGGAAGACTGATGATTCAGTTCCTCCTTTCATTTCCATTCAGAGTGTTCATCAGGAGAAAAAGGAGGAAACTACTGAACCATCGAAGAGGCGTAGGAAAAGAAAGGGAACACCTCACAGAGCTCCATTCTTCTAA 597 0.4087 MSASSSKKRGKEEQVDKASKPKWLEDFLSKTFFDHCTAHPLHRNELNKYCVNCNQSVCQHCASSCTHHQHKILQIYRHSFKDVVSLAAMEKHIDCSQIQPYKCNTHLVVSLKPLPHFGSGKKNEASSCEICSRRLAEPNLYRFCSISCKVKAVSRKTDDSVPPFISIQSVHQEKKEETTEPSKRRRKRKGTPHRAPFF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03471 198 CDD Bbox2 35 75 - -
Rops11g03471 198 MobiDBLite consensus disorder prediction 170 184 - -
Rops11g03471 198 Pfam PLATZ transcription factor 77 150 IPR006734 -
Rops11g03471 198 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 197 - -
Rops11g03471 198 SUPERFAMILY B-box zinc-binding domain 40 75 - -
Rops11g03471 198 ProSiteProfiles Zinc finger B-box type profile. 36 75 IPR000315 GO:0008270
Rops11g03471 198 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03471 Rops-Chr11 66561092 66577962 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops11g03471 PLATZ 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03471 - - tcc:18601328 251.521