Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03453 ATGGTGGTGAAGGTCTATGGTCCTGTAACAGCAGTATGTCCTCAAAGGGTGTTAGCTTGCCTCTTAGAGAAAGGGGTTGATTTTGAAATCGTGCATGTTGATCTTCATAAAGGAGAACAAAAACAACCTCACTTCCTTCTACGACAGCCCTTTGGTCAAGTTCCGGTTGTAGAGGATGGTGATTTCAGGCTCTTTGAATCCAGGGCTATTATAAGGTACTATGCATCAAAGTATGCAGACCGTGGCCCTGACCTATTGGGTACAACCTTAGAGGAGAGAGCTTTGGTGGACCAATGGCTTGAAGTAGAAGCACACAACTTCAATGAATCATGCTTCACTATCATGTTTCAGCTTGTGATCCTACCCAAGATGGGTAAGCATGGAGACATGGCCTTAGCTTATAGCCATGTGCAGAAGCTAGAGAAGGTGCTTGATGTGTATGAACATAGGCTCTCTGAAAGCACTTATCTTGCTGGGGATAACTTCACTTTGGCTGATTTGAGCCATCTTCCAGGGCTTGCACATTTGATAGAGGAAGCCAAATTGGGGCACTTAATTACTGAGAGGAAGAATGTGAATGCTTGGTGGGAGAAAATTTCAAGTAGACCAGCTTGGAAGAAATTAATGGACTTGGTTCAGTAA 642 0.4393 MVVKVYGPVTAVCPQRVLACLLEKGVDFEIVHVDLHKGEQKQPHFLLRQPFGQVPVVEDGDFRLFESRAIIRYYASKYADRGPDLLGTTLEERALVDQWLEVEAHNFNESCFTIMFQLVILPKMGKHGDMALAYSHVQKLEKVLDVYEHRLSESTYLAGDNFTLADLSHLPGLAHLIEEAKLGHLITERKNVNAWWEKISSRPAWKKLMDLVQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03453 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Rops11g03453 213 Gene3D - 87 209 - -
Rops11g03453 213 Gene3D Glutaredoxin 1 86 - -
Rops11g03453 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 210 - -
Rops11g03453 213 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Rops11g03453 213 Pfam Glutathione S-transferase, C-terminal domain 116 203 IPR004046 -
Rops11g03453 213 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Rops11g03453 213 CDD GST_N_Phi 2 77 - -
Rops11g03453 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Rops11g03453 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Rops11g03453 213 FunFam Glutathione S-transferase F2 87 209 - -
Rops11g03453 213 CDD GST_C_Phi 91 209 IPR034347 -
Rops11g03453 213 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Rops11g03453 213 SFLD Main (cytGST) 4 202 - -
Rops11g03453 213 FunFam Glutathione S-transferase F2 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03453 Rops-Chr11 66221115 66223890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03453 1 211 Glutathione S-transferase Gene Family AT3G03190 59.716 2.00e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03453 K00799 - gmx:100796010 370.548