Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03432 ATGGCGACTTCATCAGCCTCTGAAATTGTTGTCAGTGGTGAAGACAAGAATAATGTTAAATCAGATGAAGGAAACGTCCCACAAGAGGATGGCGTTACTTTAGCCATGCAATGGGCAAATTCAATTGCGTTGCCCATGGCTTTGCAAGCCGCAACTGAGTTGGGAATCTTCAACATCATTGCCAAATCTAGTGAAGGTGCCAAACTCTCTGCAAAGGACATTGCAGTTCAGATTGGTACCAACAACCCAGAAGCACCCATCATGTTGAATCGTCTTCTTAGGCTCTTGGCTAGTTACTCCATCTTACATTGCTCTGTCTCTGAAGATACTCAAAGGCCCCAGCTTCTGTACAGTCTCACCCCTGGGTCTAAATATTTTGTGACCGATGCAGATGATGTCTCACTTGGCCCCTTCTTGACCTTAGCATTGGACAAGGTCGTCTACCGATGCTGTACTGAACTAAAAGGAGCGATTCAAGAAGGAAGGACATCATTTAACCAGAATTATGGCATGCATCTCTTTGAGAATACAAAGGGTGTTAATTTTGACTTCCCTCATGTCATTGAACATGCTCCCGTATACGCTGGCGTGGATCACGTGGGAGGAAATATGTTTGAGAGTGTCCCCAAAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGACGAATACTGCTTGAAGCTCTTGAAGAACTGCTACAAAGCTATTCCTGATGATGGAAAGGTTATTGTGGTGGACACAATTCTTCCCATTCTGCCGGAGACAACAACTACTGACAAGGTCACATCCTCGTTTGATCTCTTTATGTTGACTCTATTCTCAGGAGGGAAAGAGCGAACACAACAAGAATTCATGAAATTGGCAAAAGAATCTGGATTTAGTGGCATCAAAGTCATATGTTGTGTGGCTGGCTTCTGGGTTATGGAGTTCTTTAAGTAG 948 0.4367 MATSSASEIVVSGEDKNNVKSDEGNVPQEDGVTLAMQWANSIALPMALQAATELGIFNIIAKSSEGAKLSAKDIAVQIGTNNPEAPIMLNRLLRLLASYSILHCSVSEDTQRPQLLYSLTPGSKYFVTDADDVSLGPFLTLALDKVVYRCCTELKGAIQEGRTSFNQNYGMHLFENTKGVNFDFPHVIEHAPVYAGVDHVGGNMFESVPKGDAIFMKWILHDWSDEYCLKLLKNCYKAIPDDGKVIVVDTILPILPETTTTDKVTSSFDLFMLTLFSGGKERTQQEFMKLAKESGFSGIKVICCVAGFWVMEFFK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03432 315 PIRSF O-mtase 13 178 IPR016461 GO:0008168
Rops11g03432 315 PIRSF O-mtase 174 315 IPR016461 GO:0008168
Rops11g03432 315 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Rops11g03432 315 SUPERFAMILY "Winged helix" DNA-binding domain 29 129 IPR036390 -
Rops11g03432 315 PANTHER O-METHYLTRANSFERASE 36 174 IPR016461 GO:0008168
Rops11g03432 315 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 174 315 IPR016461 GO:0008168
Rops11g03432 315 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 313 IPR029063 -
Rops11g03432 315 Gene3D - 41 163 IPR036388 -
Rops11g03432 315 MobiDBLite consensus disorder prediction 1 25 - -
Rops11g03432 315 FunFam Caffeic acid 3-O-methyltransferase 13 126 - -
Rops11g03432 315 Gene3D Vaccinia Virus protein VP39 173 315 IPR029063 -
Rops11g03432 315 Pfam O-methyltransferase domain 172 297 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03432 Rops-Chr11 65944953 65947557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03432 40 315 Monolignol Biosynthesis Gene Families AT1G77520 36.919 1.49e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03432 K13066 - aprc:113848912 332.028