Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03420 ATGAATAAAGCCAATAAAATTTGCGCCAGAGATGAAGAGCGTCCAACCAGAATCACCAGAGCAAGGGCTAGAGCCTTGGGATCCTTAGGAGGAGTTCCTTCCTACTCAAAACCCTCTTTTTGGTCCATGAAACGCAGACCATTTGGGTCTAAAGTATTCAGCAGCAAGGGTGGTTTTGTATACTTGTTAGCTCCCACACCAGAATTAGGGACTTTAGTGTTAAGCCACAGGACTCAGATTCTCTATTTTGCGGATGTTAGCTTTGTTATCATGTACTTGGAGATTGTTCCTGGCTGTTTGGTTCTTGAATCTGGAACTGGAAGTGGATCTTTGACTACTTCACTTGCTAGGGCAATTGCTCCTACAAGACTTGTCTATACATTTGATTTCCACAAACAAAGGGCTCAATCAGCTAGGGATGATTTTGAGAGGACAGTTAACTTTGACCTTCATAATGATATTGATGATTATGTACACCGTATCGGGAGGATGGGGCGAGCAGGAAAGAAAGGCCTTGCAACTGCATTCTTTAATGACAACAACGCATCCCTAGTTAAGGCTTTAGCAGATCTGATGCAGGAAACAAATCAAGAAGTACCTGCTTGGCTCTCGCGGTATGCTGCCCGATCTTCCTTTGGCGGAGGAAGGAACCGTCGATCAGGAGGTCGTTTTGGTGGCTGTGACTTTCGAAGAGAAGGTTCTTTTGGTCGGGGTGGTTCTGATTACTATGGTGCAGGAAACAGCAGTGGTGGTTCATGCCATAAGAGCTGGCTTAAGCCCTCAGGTTACAACCCAGAAGGTAGCTGCATTGGCACGTCAACGAGCTCTTCAAGGAAGGTGTCAAGCAGGTCTCGTTCGTGA 861 0.4599 MNKANKICARDEERPTRITRARARALGSLGGVPSYSKPSFWSMKRRPFGSKVFSSKGGFVYLLAPTPELGTLVLSHRTQILYFADVSFVIMYLEIVPGCLVLESGTGSGSLTTSLARAIAPTRLVYTFDFHKQRAQSARDDFERTVNFDLHNDIDDYVHRIGRMGRAGKKGLATAFFNDNNASLVKALADLMQETNQEVPAWLSRYAARSSFGGGRNRRSGGRFGGCDFRREGSFGRGGSDYYGAGNSSGGSCHKSWLKPSGYNPEGSCIGTSTSSSRKVSSRSRS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03420 286 MobiDBLite consensus disorder prediction 263 286 - -
Rops11g03420 286 MobiDBLite consensus disorder prediction 266 286 - -
Rops11g03420 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 145 IPR029063 -
Rops11g03420 286 ProSiteProfiles tRNA (adenine(57)-N(1)/adenine(58)-N(1) or adenine(58)-N(1)) (EC 2.1.1.219 or EC 2.1.1.220) family profile. 1 144 IPR014816 GO:0016429|GO:0030488|GO:0031515
Rops11g03420 286 Pfam tRNA methyltransferase complex GCD14 subunit 58 145 IPR014816 GO:0016429|GO:0030488|GO:0031515
Rops11g03420 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 220 IPR027417 -
Rops11g03420 286 PANTHER TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE 46 145 IPR014816 GO:0016429|GO:0030488|GO:0031515
Rops11g03420 286 Gene3D Vaccinia Virus protein VP39 37 205 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03420 Rops-Chr11 65657568 65658817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03420 145 200 Eukaryotic Initiation Factors Gene Family AT3G19760 33.929 9.31e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03420 K07442 K11594 aew:130771445 167.162