Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g03419 | ATGGCTACTTCATCAGAATCTAATTTATTTGTTGTCAATGGTGAAGACAAGAATAATGGTAAATCAGAAGAAGGACACGTCCCAGAAGATGACGGCGTTACTTTAGCCATGCAATGGGCAAGTTCAATTGTGTTGCCCTTGACTTTGAAATCCGCAATTGAGCTGGGAATCTTCAACATCATTGCCAAATCAGGTGAAGGTGCCAAACTCTCTGCAAAGGACATTGCAATTCAAATTGGCACCAACAACCCAGAAGCTCCCATCATGCTGGATCGTCTTCTTAGGCTGTTGGCTAGTAACTCCATCCTTCACTGCTCTGTCTCTGAAGACACTGAAAGGCACCAGCTTCTGTACAGTCTCACCCCTGGGTCCAAATATTTTGTGACCGATGCTGATAATGCCTCACTTGGACCCTTCTTGACCTTTACTATGGAAAAGGTCTTTTGCCAATGCTGGATTGAATTAAAAGGAGCGATCCAAGAAGGTGGTACTCCATTCAACAGGGTTTATGGCATGGATCTTTTTCAATATACAAAGGTAGATTCCCGGGTTAATGAGGTCTTCAATAAAGGTATGCTCAGCTCAACCACTGTAGTTATGAAGGCAGTTCTTGAACGCTACAAAGGTTTTGAACACATAAATAAACTAGTGGATGTTGGTGGTGGTCTTGGGTTTAATCTCAAATTAATCACTTCCAAATACCCTCACATCCAAGGTGTTAATTTTGACTTGCCTCATGTCATTCAACATGGTCTCGTATTTGCTGGTGTAAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAAAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAATACTGCTTGAAGCTCTTGAATAATTGCTACAAGGCTATTCCTAATTATGGAAAGGTGATTGTTGTGGACACAATTGTTCCAATTGTACCTGAGCCAACAACTATTAACAAGGTTGTCTCCTCATCTGATATTTTCATGTTGACTCAATGTCGAGGTGGGAAAGAGCGAACACAACAAGAATTCATGGAGTTGGCAACAAGATCAGGATTTAGTGGCATCAAAGTCATATGTTGTGTTGCTGGCTTCTGGGTTATGGAGTTTTTCAAGTAA | 1128 | 0.4122 | MATSSESNLFVVNGEDKNNGKSEEGHVPEDDGVTLAMQWASSIVLPLTLKSAIELGIFNIIAKSGEGAKLSAKDIAIQIGTNNPEAPIMLDRLLRLLASNSILHCSVSEDTERHQLLYSLTPGSKYFVTDADNASLGPFLTFTMEKVFCQCWIELKGAIQEGGTPFNRVYGMDLFQYTKVDSRVNEVFNKGMLSSTTVVMKAVLERYKGFEHINKLVDVGGGLGFNLKLITSKYPHIQGVNFDLPHVIQHGLVFAGVKHVGGDMFESVPKGDAIFMKWILHDWSDEYCLKLLNNCYKAIPNYGKVIVVDTIVPIVPEPTTINKVVSSSDIFMLTQCRGGKERTQQEFMELATRSGFSGIKVICCVAGFWVMEFFK* | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g03419 | 375 | PIRSF | O-mtase | 15 | 375 | IPR016461 | GO:0008168 | |
Rops11g03419 | 375 | Pfam | Dimerisation domain | 48 | 98 | IPR012967 | GO:0046983 | |
Rops11g03419 | 375 | PANTHER | O-METHYLTRANSFERASE | 37 | 358 | IPR016461 | GO:0008168 | |
Rops11g03419 | 375 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Rops11g03419 | 375 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Rops11g03419 | 375 | Pfam | O-methyltransferase domain | 152 | 357 | IPR001077 | GO:0008171 | |
Rops11g03419 | 375 | Gene3D | - | 13 | 127 | IPR036388 | - | |
Rops11g03419 | 375 | FunFam | Caffeic acid O-methyltransferase | 128 | 375 | - | - | |
Rops11g03419 | 375 | FunFam | Caffeic acid 3-O-methyltransferase | 16 | 127 | - | - | |
Rops11g03419 | 375 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 133 | 373 | IPR029063 | - | |
Rops11g03419 | 375 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 37 | 375 | IPR016461 | GO:0008168 | |
Rops11g03419 | 375 | SUPERFAMILY | "Winged helix" DNA-binding domain | 31 | 130 | IPR036390 | - | |
Rops11g03419 | 375 | Gene3D | Vaccinia Virus protein VP39 | 128 | 375 | IPR029063 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g03419 | Rops-Chr11 | 65650423 | 65653439 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g03419 | 26 | 375 | Monolignol Biosynthesis Gene Families | AT5G54160 | 50.000 | 6.27e-124 | 360 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g03419 | K13066 | - | gmx:100789402 | 456.832 |