Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03418 ATGGCGACTTTATCAGATTCTAATTTATTTGTCAATGGTGAAGACAAGAATAATGTTAAATTAGAAGAAGGACATGTCCTACAAGAGGATGGCGTTACTTTAGCCATGCAATGGGCAAGTTCAATTGTGTTGCCCTTGACTTTGAAATCCGCAATTGAACTAGGAATCTTCAACATTATTGCCAAATCAGGTGAAGGTGCCAAACTCTCTGCAAAGGACATTGCAATTCAAATTGGCACCAACAACCCAGAAGCTCCCATCATGCTGGATCGTCTTCTTAGGCTGTTGGCTAGTTACTCCATCCTTCACTGCTCTGTCCCTGAAGATACTGAAAGGCATCAGCTTCTGTACAGTCTCACTCCTGGGCCCAAATATTTTGTGACCGATGCTGATAATGTCTCACTTGGGCCCTTCTTAACCTTAATTATGGAAAAGGTCTTTTGCCAAAGCTGGACTGAAGTAAAAGGAGCGATCCTTGAAGGTGGTACCCCATTCAACAAGTTTTATGGCATGGATATCTTTGAGTACACAAAGGTAGATTCCAAGGTTAATGAGGTTTTCAATAAAGGTATGCTTAGTTCAACCACTGTAGTTATGAAGACAGTTCTTGAACGCTACAAAGGTTTTGAACACATAAATAAACTAGTGGATGTTGGTGGTGGTCTTGGGTTTAATCTCAAATTAATCACTTCCAAATACCCTCACATCCAAGGTGTTAATTTTGACTTGCCTCATGTCATTCAACATGGTCTCGTCTATGCTGGTGTAAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAAAGGAGATGCCATTTTTATGAAGGTGATTGTTGTAGACACAATTGTTCCAATTGTACCTGAGACAACAACTATTAACAAGGTTGCCTCCTCATTTGATCTTTTCATGTTGACTCAATGTCGAGGTGGGAAAGAGCGAACACAACAAGAATTCATGGAATTGGCAACAAGATCTCGATTTAGTGACATCAAAATCGTATGTTATGTCGCTGGCTTTTGGGTTATGGAGTTCATCAAGTAA 1044 0.4023 MATLSDSNLFVNGEDKNNVKLEEGHVLQEDGVTLAMQWASSIVLPLTLKSAIELGIFNIIAKSGEGAKLSAKDIAIQIGTNNPEAPIMLDRLLRLLASYSILHCSVPEDTERHQLLYSLTPGPKYFVTDADNVSLGPFLTLIMEKVFCQSWTEVKGAILEGGTPFNKFYGMDIFEYTKVDSKVNEVFNKGMLSSTTVVMKTVLERYKGFEHINKLVDVGGGLGFNLKLITSKYPHIQGVNFDLPHVIQHGLVYAGVKHVGGDMFESVPKGDAIFMKVIVVDTIVPIVPETTTINKVASSFDLFMLTQCRGGKERTQQEFMELATRSRFSDIKIVCYVAGFWVMEFIK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03418 347 Gene3D Vaccinia Virus protein VP39 279 336 IPR029063 -
Rops11g03418 347 Gene3D - 12 126 IPR036388 -
Rops11g03418 347 PANTHER O-METHYLTRANSFERASE 36 328 IPR016461 GO:0008168
Rops11g03418 347 SUPERFAMILY "Winged helix" DNA-binding domain 30 129 IPR036390 -
Rops11g03418 347 PIRSF O-mtase 276 347 IPR016461 GO:0008168
Rops11g03418 347 PIRSF O-mtase 14 278 IPR016461 GO:0008168
Rops11g03418 347 FunFam Caffeic acid 3-O-methyltransferase 15 126 - -
Rops11g03418 347 Pfam O-methyltransferase domain 151 281 IPR001077 GO:0008171
Rops11g03418 347 Pfam Dimerisation domain 47 97 IPR012967 GO:0046983
Rops11g03418 347 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 347 IPR016461 GO:0008168
Rops11g03418 347 Gene3D Vaccinia Virus protein VP39 128 278 IPR029063 -
Rops11g03418 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 345 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03418 Rops-Chr11 65618670 65621009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03418 25 347 Monolignol Biosynthesis Gene Families AT5G54160 45.198 5.39e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03418 K13066 - gmx:100789402 388.267