Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03405 ATGGCGACTTCATCAAAATCTAATGGAGTTGTTAATGGAAAATACAATAATAATGTTAAGTTAGATGAAGGGCACGTCCCACAAGAGGATGGCGTTAGTTTTGCCATGCAATGGGCAATTTCAATTGTGTTGCCTTTGTCTTTGCAATCCGCAATTGAACTGGGAATTTTCAACATCATTGCCAAATCAGGTGAAGGTGCCAAACTCTCTGCAAAGGACATTGCAGTTCAGATTGGTACCAACAACCCAGAAGCACCCATCATGCTGGATCGTCTTCTTAGGCTGTTGGCTAGTTACTCCATCTTACATTGCTCTGTCTCTGAAGATACTCAAAGGCCCCAGCTTCTGTACAGTCTCACCCCTGGGTCCAAATATTTTGTGACTGATGCTGATGGTGTCTCGCTTGGCCCCTTCTTGACCTTTGCAAATGACAAGGTCTTCTGCCAAAGCTGGATTGAACTAAAAGGAGCGATCCAAGAAGGTGGTACACCATTCAACAGGGTTTATGGTATGCATCCCTTTGATTATGCAAGGGTAGATCCGAGGGTTAATGAGGTTTTCAACAAAGGGATGACAAGCTCTACCACCATAATTATGAAGGCAATTCTTGAACTCTACAAAGGTTTTGAACACATAAATAGACTAGTGGATGTTGGCGGTGGTCTTGGCATTAATCTCAAATTGATCACTTCCAAATATCCTCACATCCAGGGTGTTAATTTAGACTTGCCTCATGTCATTGAACATGCTCCCGTCTATGATGGGGTGGAGCATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGGGTACTTCATGATTGGAGTGATGAATACTGCCTGAAGCTCTTGAAGAATTGCTACAATGCTATTCCTGATGATGGAAAGGTTATTGTTGTGGACATAATTCTTCCTATTGTGCCTGAGACAACTTTTAACGACAAGGTTGCTTCCACATTTGATCTCTCCTTGTTAACTCTATTCCAAGGTGGGAAAGAGCGAACACAACAAGAATTCATGAAATTGGCAACAAGATCTGGATTTAGTGGCATCAAAGTTACCACCTTGCGTCGCACCTTTGCTCCTCGCCGGATCTGCGCCGCTCTGCTCCTCGCCGGATCCGCAAAACTCATCCATGTAGCATTCCCTCACCTCAAATGCACTGGATTTGACCAACCACAGGTTGTGGCTAACTTGTCTGGAAACGAAAATTTGAACTTTGTCGGCGGAGATATGTTCAAATCCATCCCTCCTGCAGATGCAGTTTTACTCAAGTGGGTTCTGCATGACTGGAATGATGAACTCTCCTTGAAGATATTGAAGAACTGCAAGGAAGCTATTTCAGGCAGAGGGAAAGAAGGGAAGGTGATTATCATAGACATATCAATTGATGAAACAACTTTGTGTGGGAGCATTGATACATGGGAGAAAAGAAAATCAATTCCAATACAACTACCTGCAGGAAAGTCACCTGTTGGTGATACACGGTTCGATTCCATTCGATCAACTGGACTTACCGTGGGTTCCCCAAGATGTTCTACCTGCTTCCATATCATATGCAGCTTATTCCCCGCAATGATCGAGTTAATATATGCTGCATTCTGTGATGCAAACATTGGGGTCTTCGATGCTGATAGCTTGAGACTAAGATGTCGTATTGCACCATCAATATGCTTATCATCTGTCGCTTTAAGTGGAAGCCAAGCTGTGTATCCTCTTGTGGTTGCGGCTCATCCACTAGAACCTAACCAGTTTGCTGTTGGGTTGACTGATGGGTTTGTCAAAGTGATAGAGCCCACTGAATCAGTGGGTAAGTGGGGATCTTCTCCACCAATGGACAATGGAATATTGAATGGTAGGGCAGCATCTTCATCTACAACAAGCAACCACACGGCCGATCAGGCCCAACGATAA 1935 0.4393 MATSSKSNGVVNGKYNNNVKLDEGHVPQEDGVSFAMQWAISIVLPLSLQSAIELGIFNIIAKSGEGAKLSAKDIAVQIGTNNPEAPIMLDRLLRLLASYSILHCSVSEDTQRPQLLYSLTPGSKYFVTDADGVSLGPFLTFANDKVFCQSWIELKGAIQEGGTPFNRVYGMHPFDYARVDPRVNEVFNKGMTSSTTIIMKAILELYKGFEHINRLVDVGGGLGINLKLITSKYPHIQGVNLDLPHVIEHAPVYDGVEHVGGDMFESVPNGDAIFMKWVLHDWSDEYCLKLLKNCYNAIPDDGKVIVVDIILPIVPETTFNDKVASTFDLSLLTLFQGGKERTQQEFMKLATRSGFSGIKVTTLRRTFAPRRICAALLLAGSAKLIHVAFPHLKCTGFDQPQVVANLSGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETTLCGSIDTWEKRKSIPIQLPAGKSPVGDTRFDSIRSTGLTVGSPRCSTCFHIICSLFPAMIELIYAAFCDANIGVFDADSLRLRCRIAPSICLSSVALSGSQAVYPLVVAAHPLEPNQFAVGLTDGFVKVIEPTESVGKWGSSPPMDNGILNGRAASSSTTSNHTADQAQR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03405 644 CDD AdoMet_MTases 214 311 - -
Rops11g03405 644 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Rops11g03405 644 Pfam O-methyltransferase domain 382 471 IPR001077 GO:0008171
Rops11g03405 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 382 474 IPR029063 -
Rops11g03405 644 Gene3D - 12 126 IPR036388 -
Rops11g03405 644 Gene3D Vaccinia Virus protein VP39 127 368 IPR029063 -
Rops11g03405 644 SUPERFAMILY "Winged helix" DNA-binding domain 29 129 IPR036390 -
Rops11g03405 644 Gene3D Vaccinia Virus protein VP39 380 485 IPR029063 -
Rops11g03405 644 Pfam Dimerisation domain 47 97 IPR012967 GO:0046983
Rops11g03405 644 MobiDBLite consensus disorder prediction 612 644 - -
Rops11g03405 644 FunFam Caffeic acid O-methyltransferase 127 368 - -
Rops11g03405 644 PANTHER O-METHYLTRANSFERASE 38 355 IPR016461 GO:0008168
Rops11g03405 644 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 376 IPR016461 GO:0008168
Rops11g03405 644 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 382 531 IPR016461 GO:0008168
Rops11g03405 644 FunFam Caffeic acid 3-O-methyltransferase 16 126 - -
Rops11g03405 644 MobiDBLite consensus disorder prediction 625 644 - -
Rops11g03405 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 364 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03405 Rops-Chr11 65375194 65391479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03405 378 473 Monolignol Biosynthesis Gene Families AT5G54160 39.583 5.49e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03405 K13066 - aprc:113848912 459.914