Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03402 ATGATGGTGGTAGGAGCAGCCCCAATGGATCATAGGGGATATGTCAAGGAGCTCGAATTGGTGGTCAAATTTGATGTTCCAAACCACTACGAAGATTATGTATATCGTGTTTGGCGCACTGGCAGGTCTGGACGAAAGGGTTGTGCCATTACATTTATTTCTGAGAAAGATTCAAGATATGCACCAGATCTAGTGAAAGGCTTGGAGCTCTCTGAGCAAATTGTTCTTAATGATTTGAAAGCTCTTGTTGATAGCTTTATGGAAAAAGTGAATCAAGGACTGGAACAAGTCCATGGTACTGGTTATGGAGGCAGTGGCTTTAAATTTAACGAAGAGGAAGATGAGGTGAAGAGAGCAATGAAGAAAGCCCAAGCCAAAGAATATGGGTTTAATGAAGACAACCCAGACCTAGCCACCGTCAGTAGTAGCCATGACATGTCCATAGCAGAGAAAGGCACTTTTAATGGGGTTATACTAGACATTTTACAAATACAAGAAATTTTGTAA 507 0.4122 MMVVGAAPMDHRGYVKELELVVKFDVPNHYEDYVYRVWRTGRSGRKGCAITFISEKDSRYAPDLVKGLELSEQIVLNDLKALVDSFMEKVNQGLEQVHGTGYGGSGFKFNEEEDEVKRAMKKAQAKEYGFNEDNPDLATVSSSHDMSIAEKGTFNGVILDILQIQEIL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03402 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 75 IPR027417 -
Rops11g03402 168 Gene3D - 14 86 IPR027417 -
Rops11g03402 168 PANTHER RNA HELICASE 15 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03402 Rops-Chr11 65339164 65345224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03402 15 64 Eukaryotic Initiation Factors Gene Family AT1G72730 44.000 2.42e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03402 K12811 - ini:109181869 214.157