Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03390 ATGATGTGGTACGAGAGCGAGAGGTTCTATGATCAGACCGCCGCTGCACCTGGCAATGGAGTATTATGTGGGAACAAGACAGCAAAGCAAGCCACTGATTTCAAATCAACTGGACTACAAGTGCTAATGAACCTCCAAATAGCAACACCCAGAATTAAAGGTTTTTTTGCAGCCACTAAGACACATGTGGTTGGTGATGGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACTGAGAAAGGTTCAAGCAAGAAGTGGGTCATTATAGGTGGTGTTGTTGGAGGTGGAGTTCTTGTGATCCTCCTTGCATTTTTTGCCTGGCGACGATGCAGAAAACCCAACAGGGTTCCTAGAGGTGACATATTGGGAGCAACCGAGCTGAAAGGTCCAGTTAACTACAAATATAACGATTTGAAAGCTGCAACAAAAAATTTCAATGACGAAAATAAACTAGGAGAAGGAGGCTTTGGCACTGTATACAAGGGTACTCTAAAAAATGGAAAAATTGTAGCAGTCAAGAAATTAGTTTTGGGCAAATTCACCAAGATAGAGGATGATTTTGGAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGCCAAACAGTAGCCTTGACAGATTCTTATTTGGTGAGAATAAAGGTTCCCTCAACTGGAAACAAAGATATGATATAATTTTAGGCACAACAAGGGGACTGGCCTATCTACATGAGGAATTTCACATTTCCATCATACATAGAGATATAAAGACTGGCACTATCCTCCTGAATGAAGATCTTCAACCCAAAATTGCTGATTTTGGTTTGGCACGGCTTCTGCCAAGGGATAGTTCCCATCTAAGCACAAGATTTACAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGAAGTGAAGCCTGATGATGATGGTCATGAATACCTTCTTCAACGAACATGGAAACTGCATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGACTTAGACCCAAATGAGTATGATGGAGAAGAAGTTAAGAAAGTCATAGGGATTGCTTTGTTGTGCACTCAAGCTTCAGCTGCAACAAGGCCAACAATGTCTGAAGTGGTAGTCCTACTCCAAAGCAAGAACTTACTGAACCACCTGCAACCAACTATGCCTGTGTTTGTTGATGCAAATCTCAAGTCTCGGGAAGGCAATTACGAAGTTGACAAGCCTGCAGGTTTGAACAAAAAATTGATCAAGCTTTACGAGATGTGA 1398 0.4185 MMWYESERFYDQTAAAPGNGVLCGNKTAKQATDFKSTGLQVLMNLQIATPRIKGFFAATKTHVVGDGAIYAIAQCVETATEKGSSKKWVIIGGVVGGGVLVILLAFFAWRRCRKPNRVPRGDILGATELKGPVNYKYNDLKAATKNFNDENKLGEGGFGTVYKGTLKNGKIVAVKKLVLGKFTKIEDDFGSEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDRFLFGENKGSLNWKQRYDIILGTTRGLAYLHEEFHISIIHRDIKTGTILLNEDLQPKIADFGLARLLPRDSSHLSTRFTGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKPDDDGHEYLLQRTWKLHERGMHLELVDKDLDPNEYDGEEVKKVIGIALLCTQASAATRPTMSEVVVLLQSKNLLNHLQPTMPVFVDANLKSREGNYEVDKPAGLNKKLIKLYEM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03390 465 FunFam Cysteine-rich receptor-like protein kinase 2 113 223 - -
Rops11g03390 465 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Rops11g03390 465 SUPERFAMILY Protein kinase-like (PK-like) 132 431 IPR011009 -
Rops11g03390 465 FunFam Cysteine-rich receptor-like protein kinase 2 224 427 - -
Rops11g03390 465 ProSiteProfiles Protein kinase domain profile. 147 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03390 465 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 440 - -
Rops11g03390 465 CDD STKc_IRAK 153 420 - -
Rops11g03390 465 Gene3D Phosphorylase Kinase; domain 1 123 223 - -
Rops11g03390 465 Gene3D Transferase(Phosphotransferase) domain 1 224 431 - -
Rops11g03390 465 Pfam Protein kinase domain 147 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03390 Rops-Chr11 65128195 65145019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03390 81 426 Receptor kinase-like Gene Family AT1G56120 48.851 2.17e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g03390 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03390 - - vun:114187094 630.943