Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03389 ATGCTGCAATTTAAGCTACTTGTCTTAACCTTGATATGGTGGAGCACTAATCAACATGGTGCAGTTGCAGACCCACTAAACACTGGTTGCAGCACATACAACGCATCAAACTCGCGTAATTTGTTTGCCAACATCAATGAAACATTTTCAAACCTGAGAACACAGGTTAGCAATCAAAGCAAGCATTTTGCCACAGCACAAGAAGCCAGGGGAGAGGTCATCACATATACTATGTTTCAATGCAGAAATTATCTTTCTAGAAATGACTGTCTTGGTTGCTTCAACACTGCCTCTACCCAAATCCGCAACTGCTCCGTTGCCAACGGTGCCAGAGTCATATATGATGGCTGCTTCCTGAGGTACGAGAGCGAGAGGTTCTACGATCAGACCAATGCACAAGGCAATGGTGTATCATGTGGGAACAACACTGCAAAGGCAACCACTGCTTTTAGAACAGTTGGACAACAAGCACTAATGGACCTCCAAATAGCAACACCCAGGATCAAAGGTTTCTTTGCGGCTACTAAGACACAGGTGGCTGCTGGTGGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACAGAGAGTAGTTGTCTCGATTGCATGACAATTGGATACAATAACTTACAAACTTGTCTTCCCAATTCAGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATACTCAGAGAGACCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTATTTAAATCAAGGTTCAAGCAACAAGAAGTGGGCCATTATAGGTGGCGTTGTTGGAGGTGGAGTTCTTGTGATCCTCCTTGCATTTTTTGCCTGGCGAAGATCCAGAAAACCCAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAACTATAAATATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGACGAAAATAAACTAGGAGAAGGAGGCTTTGGAGCTGTATACAAGGGTACTTTGAAAAATGGAAAAGTTGTTGCAGTCAAGAAATTAGTTTTGGGCAAATCAAGCAAGATGGAGGATGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGCCCAATAGTAGCCTTGACAAATTCTTATTTGGTGAAAAGAAAGGTTCCCTCAACTGGAAACAAAGATATGATATAATTTTAGGCACAGCAAGGGGACTGGCCTATCTACATGAGGAATTTCACATTTCCATCATACATAGAGATATAAAGACTGGCAATATCCTCCTGAATGAAGATCTTCAACCCAAAATTGCTGATTTTGGTTTGGCACGGCTTCTGCCAGGGGATCGTTCTCATGTTAGCACAAGATTTGCAGGAACATTCTATGGCATTGTAATCCTAGAAATCATAAGTGGTCAAAAGAGTACCGAAGTGAACCCTGATGATGATGGACATGAATACCTTCTTCAACGAACATGGAAATTGCATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGCCTTAGACCCTAATGAGTATGATGGAGAAGAAGTTAAGAAAGTCATAGAGATTGCTTTGTTGTGCACTCAAGCATCTGCTGCGACCAGGCCAACAATGTCTGAAGTAGTAGTCCTACTACAAAGCAAGAACTTACTGAATAACCTGCAACCAACTATGCCTGTGTTTGTTGATGCAAATCTCAAGTCTCGGGAAGCCATCTCTACCTCAGCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCACTTCAATTCTGTCTGCTCGATGA 1854 0.4218 MLQFKLLVLTLIWWSTNQHGAVADPLNTGCSTYNASNSRNLFANINETFSNLRTQVSNQSKHFATAQEARGEVITYTMFQCRNYLSRNDCLGCFNTASTQIRNCSVANGARVIYDGCFLRYESERFYDQTNAQGNGVSCGNNTAKATTAFRTVGQQALMDLQIATPRIKGFFAATKTQVAAGGAIYAIAQCVETATESSCLDCMTIGYNNLQTCLPNSDGRAYDAGCFMRYSERPFFADNQTIDITPYLNQGSSNKKWAIIGGVVGGGVLVILLAFFAWRRSRKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSDENKLGEGGFGAVYKGTLKNGKVVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDKFLFGEKKGSLNWKQRYDIILGTARGLAYLHEEFHISIIHRDIKTGNILLNEDLQPKIADFGLARLLPGDRSHVSTRFAGTFYGIVILEIISGQKSTEVNPDDDGHEYLLQRTWKLHERGMHLELVDKALDPNEYDGEEVKKVIEIALLCTQASAATRPTMSEVVVLLQSKNLLNNLQPTMPVFVDANLKSREAISTSATGSSTSNATASTSILSAR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03389 617 Gene3D Transferase(Phosphotransferase) domain 1 394 482 - -
Rops11g03389 617 Gene3D Transferase(Phosphotransferase) domain 1 483 587 - -
Rops11g03389 617 Pfam Protein kinase domain 318 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03389 617 Pfam Salt stress response/antifungal 139 233 IPR002902 -
Rops11g03389 617 Pfam Salt stress response/antifungal 34 123 IPR002902 -
Rops11g03389 617 SUPERFAMILY Protein kinase-like (PK-like) 305 592 IPR011009 -
Rops11g03389 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Rops11g03389 617 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Rops11g03389 617 FunFam Protein kinase superfamily protein 394 466 - -
Rops11g03389 617 Gene3D Phosphorylase Kinase; domain 1 290 393 - -
Rops11g03389 617 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 76 605 - -
Rops11g03389 617 ProSiteProfiles Gnk2-homologous domain profile. 132 236 IPR002902 -
Rops11g03389 617 FunFam Cysteine-rich receptor-like protein kinase 2 134 236 - -
Rops11g03389 617 FunFam Cysteine-rich receptor-like protein kinase 2 281 393 - -
Rops11g03389 617 Gene3D - 23 126 IPR038408 -
Rops11g03389 617 Gene3D - 135 236 IPR038408 -
Rops11g03389 617 FunFam Cysteine-rich receptor-like protein kinase 2 23 126 - -
Rops11g03389 617 SMART serkin_6 317 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03389 617 MobiDBLite consensus disorder prediction 595 617 - -
Rops11g03389 617 ProSiteProfiles Protein kinase domain profile. 317 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03389 617 ProSitePatterns Protein kinases ATP-binding region signature. 323 346 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03389 Rops-Chr11 65118461 65128512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03389 21 617 Receptor kinase-like Gene Family AT1G70520 35.024 6.21e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g03389 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03389 - - gmx:100801131 895.96