Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03388 ATGATGAGGTACGAGAGCGAGAGGTTCTACGATCAGACCGCTGCACCTGGCAATGGAGTATCATGTGGGAACAAGACAGCAAAGCAAGCCACTGCTTTCAAAGCAACTGGACTACAAGTGCTAATGAACCTCCAAATAGCAACACCCAGAATTAAAGGATTCTTTGCAGCTACTAAGACACGTGTGGTTGGTGATGGTGAAATTTATGCCATTGCACAGTGTGTTGAAACTGCCAGAGAGAGTAGTTGTCTCAATTGCATGACAGTTGGATACAATAACTTACAAACTTGTCTTCCCAATTCGGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATACTCAGAGAGACCCTTCTTTGCTGATAACCAGACCATTGATATCACGGCTTTTTTCCACAAATACCCCCGTTTAAAAATGGAATTCTCAAAATACCCCTGTTTTCAAAATATTTCTTCAAATACCCCTGTTTTGGCCACGCTGACGCGGGGAGGTTCAAGCAACAAAAAGTGGGCCATTATAGGTGGTGTTGTTGGAGGTGGAGTTCTTGTGATCCTCCTTGCATTTTTTGCCTGGCTAAGATCCAGAAAACCCAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAATTACAAATATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGACGAAAATAAATTAGGAGAAGGAGGCTTTGGAGCTGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCAGTCAAGAAATTAGTTTTGGGCAAATCAAGCAAGATGGAGGATGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGCCCAATAGTAGCCTTGACAAATTCTTATTTGGTGACAAGAAAGGTTCCCTCAACTGGAAACAAAGATATGATATAATTTTAGGCACAGCAAGGGGACTGGCCTATCTACATGAGGAATTTCACATTTCCATCATACATAGAGATATAAAGACTGGCAATATCCTCGTGAATGAAGATCTTCTGCCCAAAATTGCTGATTTTGGATTGGCACGGCTTCTGCCAGGGGATCAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGCGGTCAAAAGAGTACCGAAGTGAAGCCTGATGATGATGGACATGATTACCTTCTTCAACGAACATGGAAATTGCATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGCCTTAGACCCTAATGAGTATGATGGAGAAGAAGTTAAGAAAGTCATAGAGATTGCTTTGTTGTGCACTCAAGCATCTGCTGCAACCAGGCCAACAATGTCTGAAGTAGTAGTCCTACTACAAAGCAAGAACTTACTGAATAACCTGCAACCAACTATGCCTGTGTTTGTTGATGCAAATCTCAAATCTCGAGAAGCCATCTCTACCTCAGCAACTGGTTCTTCTACATCTAATGCTACCGCCTCCACTTCAATTCTGTCTGCTCGATGA 1578 0.4189 MMRYESERFYDQTAAPGNGVSCGNKTAKQATAFKATGLQVLMNLQIATPRIKGFFAATKTRVVGDGEIYAIAQCVETARESSCLNCMTVGYNNLQTCLPNSDGRAYDAGCFMRYSERPFFADNQTIDITAFFHKYPRLKMEFSKYPCFQNISSNTPVLATLTRGGSSNKKWAIIGGVVGGGVLVILLAFFAWLRSRKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSDENKLGEGGFGAVYKGTLKNGKVVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDKFLFGDKKGSLNWKQRYDIILGTARGLAYLHEEFHISIIHRDIKTGNILVNEDLLPKIADFGLARLLPGDQKADTYSYGIVVLEIISGQKSTEVKPDDDGHDYLLQRTWKLHERGMHLELVDKALDPNEYDGEEVKKVIEIALLCTQASAATRPTMSEVVVLLQSKNLLNNLQPTMPVFVDANLKSREAISTSATGSSTSNATASTSILSAR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03388 525 Gene3D Phosphorylase Kinase; domain 1 205 306 - -
Rops11g03388 525 FunFam Os07g0541700 protein 307 394 - -
Rops11g03388 525 MobiDBLite consensus disorder prediction 503 525 - -
Rops11g03388 525 Gene3D - 19 119 IPR038408 -
Rops11g03388 525 FunFam Cysteine-rich receptor-like protein kinase 2 17 119 - -
Rops11g03388 525 ProSiteProfiles Gnk2-homologous domain profile. 15 119 IPR002902 -
Rops11g03388 525 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Rops11g03388 525 ProSiteProfiles Protein kinase domain profile. 230 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03388 525 SUPERFAMILY Protein kinase-like (PK-like) 213 476 IPR011009 -
Rops11g03388 525 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 8 384 - -
Rops11g03388 525 SMART serkin_6 230 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03388 525 Gene3D Transferase(Phosphotransferase) domain 1 384 495 - -
Rops11g03388 525 Pfam Salt stress response/antifungal 22 116 IPR002902 -
Rops11g03388 525 Gene3D Transferase(Phosphotransferase) domain 1 307 383 - -
Rops11g03388 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Rops11g03388 525 CDD STKc_IRAK 236 477 - -
Rops11g03388 525 Pfam Protein tyrosine and serine/threonine kinase 233 380 IPR001245 GO:0004672|GO:0006468
Rops11g03388 525 FunFam Cysteine-rich receptor-like protein kinase 2 195 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03388 Rops-Chr11 65060687 65065025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03388 155 523 Receptor kinase-like Gene Family AT1G56120 41.162 2.24e-87 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g03388 PK_Tyr_Ser-Thr 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03388 - - gmx:112997608 688.337