Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03386 ATGCTGCAATTTAAGCTACTTGCCTTAACCTTGATATGGTGGAGTACTAATCAACATGGTGCAGTTGCAGACCCACAAACACGTCTACTAAACACTGGATGCAGCACATACAACGCATCAAACTTGCGTAGCTTCTCTGCCAACATCAATGAAACATTTTCAAACCTGAGAACACAGGTTAGCAATCAAAGAAAGCATTTTGCCACAGCACAAGAAGCCAGGGGAGAGGTCATCACATATACTATGTTTCAATGCAGAAATTATCTTTCCAGAAATGACTGTCTTGGTTGCTTCAACACTGCCTCTACCCAAATCCGCAACTGCTCCGCTGCTAACGGTGCCAGAGTCATCTATGATGGCTGCTTCCTCAGGTACGAGAGCGAGAGGTTCTACGATCAGACCAATGTACCTGGCAATGGTGTATCATGTGGGAACAACACTGCAAAGGCAGCCACTGCTTTTAGAACAGTTGGACAACAAGCACTAATGGACCTCCAAATAGCAACACCAAGGATCAAAGGTTTCTTTGCAGCTACTAAGACACAGGTGGCTGGTGGTGGTGAAATTTATGCCATTGCACAGTGTGTTGAAACTGCCACTGAGAGTACTTGTCTCAATTGCATGACAGTTGGATACAATAACTTACAAACTTGTCTTCCCAATTCGGATGGTAGAGCATATGATGCAGGGTGTTTTATGAGATACTCAGAGAGACCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTATTTAAATCAAGGAGGTTCAAGCAACAAGAAGTGGGCCATTATAGGTGGCGTTGTTGGAGGTGGAGTTCTTGTGATCCTCCTTGCATTTTTTGCCTGGCGAAGATCCAGAAAACCCAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAATTACAAATATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGACGAAAATAAATTAGGAGAAGGAGGCTTTGGAGCTGTATACAAGGGTACTTTGAAAAATGGAAAGGTTGTTGCAGTCAAGAAATTAGTTTTGGGCAAATCAAGCAAGATGGAGGATGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGCCCAATAGTAGCCTTGACAAATTCTTATTTGGTGACAAGAAAGGTTCCCTCAACTGGAAACAAAGATATGATATAATTTTAGGCACAGCAAGAGGATTGGCCTATCTACATGAGGAATTTCACATTTCCATCATACATAGAGATATAAAGACTGGCAATATCCTCGTGAATGAAGATCTTCTGCCCAAAATTGCTGATTTTGGTTTGGCACGGCTTCTGCCAGGGGATCGTTCTCATGTTAGCACAAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGAAGTGAAGCCTGATGATGATGGACATGAATACCTTCTTCAACGAACATGGAAATTGCATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGCCTTAGACCCTAATGAGTATGATGGAGAAGAAGTTAAGAAAGTCATAGAGATTGCTTTGTTGTGCACTCAAGCATCTGCTGCAACCAGGCCAACAATGTCTGAAGTAGTAGTCCTACTACAAAGCAAGAACTTACTGAATAACCTGCAACCAACTATGCCTGTGTTTGTTGATGCAAATCTCAATTCTCGGGGAGCCATCTCTACCTCAGCAACTGGTTCTTCTACATCTAATGCTACTGCCTCCATTTCAATTCTGTCTGCTCGATGA 1932 0.4234 MLQFKLLALTLIWWSTNQHGAVADPQTRLLNTGCSTYNASNLRSFSANINETFSNLRTQVSNQRKHFATAQEARGEVITYTMFQCRNYLSRNDCLGCFNTASTQIRNCSAANGARVIYDGCFLRYESERFYDQTNVPGNGVSCGNNTAKAATAFRTVGQQALMDLQIATPRIKGFFAATKTQVAGGGEIYAIAQCVETATESTCLNCMTVGYNNLQTCLPNSDGRAYDAGCFMRYSERPFFADNQTIDITPYLNQGGSSNKKWAIIGGVVGGGVLVILLAFFAWRRSRKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSDENKLGEGGFGAVYKGTLKNGKVVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDKFLFGDKKGSLNWKQRYDIILGTARGLAYLHEEFHISIIHRDIKTGNILVNEDLLPKIADFGLARLLPGDRSHVSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEVKPDDDGHEYLLQRTWKLHERGMHLELVDKALDPNEYDGEEVKKVIEIALLCTQASAATRPTMSEVVVLLQSKNLLNNLQPTMPVFVDANLNSRGAISTSATGSSTSNATASISILSAR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03386 643 ProSiteProfiles Protein kinase domain profile. 322 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03386 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Rops11g03386 643 FunFam Cysteine-rich receptor-like protein kinase 2 26 130 - -
Rops11g03386 643 Pfam Protein tyrosine and serine/threonine kinase 325 592 IPR001245 GO:0004672|GO:0006468
Rops11g03386 643 Gene3D Phosphorylase Kinase; domain 1 295 398 - -
Rops11g03386 643 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Rops11g03386 643 Gene3D Transferase(Phosphotransferase) domain 1 399 606 - -
Rops11g03386 643 FunFam Cysteine-rich receptor-like protein kinase 2 286 398 - -
Rops11g03386 643 Pfam Salt stress response/antifungal 143 237 IPR002902 -
Rops11g03386 643 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Rops11g03386 643 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 620 - -
Rops11g03386 643 ProSiteProfiles Gnk2-homologous domain profile. 136 240 IPR002902 -
Rops11g03386 643 SUPERFAMILY Protein kinase-like (PK-like) 305 594 IPR011009 -
Rops11g03386 643 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Rops11g03386 643 FunFam Cysteine-rich receptor-like protein kinase 2 399 602 - -
Rops11g03386 643 SMART serkin_6 322 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03386 643 FunFam Cysteine-rich receptor-like protein kinase 2 138 240 - -
Rops11g03386 643 MobiDBLite consensus disorder prediction 622 643 - -
Rops11g03386 643 Gene3D - 26 130 IPR038408 -
Rops11g03386 643 Gene3D - 140 240 IPR038408 -
Rops11g03386 643 CDD STKc_IRAK 328 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03386 Rops-Chr11 65021763 65027115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03386 7 643 Receptor kinase-like Gene Family AT1G70520 36.055 1.09e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g03386 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03386 - - gmx:100801131 946.806