Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03384 ATGCTGCAACTCAAGCTCATAGCCTTAACCTTGTTCATGTTATGGTCATGGAGGAGCTTTCATGGTGCACTAGGAGACCCTCAAACTCGTTTACTCAACAAGGGTTGTAGCCAATACAACGCTACCAACTTATCCAATTTCAATCAAAATCTAAACGCAAGTTTGGCTGATCTGAAAGCACAGGTTACTAACCAACGCAAACACTTTGCCACAACACAACAAGCTAGGGGAACAGACCCTGTTTATGCTTTGTTTCAATGTAGAAACTACCTCTCTAACACCGACTGCGCCGCCTGCTTCGCCGTCGCCGCCGCCCAAATCCGGAACTGCTCTGCCGGTGCCAACGGTGCCCGTGTCATTTATGATGGTTGCTTCCTTAGGTATGAGAGCAATGGTTTCTTTGATCAAACCACTCTACCTGGCAACAGTATGGTTTGTGGAAATCAAACTGCAACTGGAGCCACTGCTTTTAGTGCAACTGCACAGCAAGTGCTAATGGACCTCCAAATAGCAACACCAAGAATTAAAGGTTTCTTTGCAGCTACTAAGACACAGGTGGCTGGTGGTGATGCAATCTATGCCATTGCACAATGTGCTGAAACTGCCACTGAGAGTGGTTGTCTGGATTGCTTGTCAGTTGGATACAACAACATACAGAGTTGTCTTCCCAATACAAATGGTAGGGCATTTGATGCTGGCTGTTTTATGAGATACTCAGAGACATCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTTCTTAAATCAAGGAGGTTCAAGCAAGAAGGGGGCCATTATTGGTGGGGTTGTTGGAGGTGTTGCTCTTGTTGTGATCCTCCTTGCACTATTTGCCTGGTTTAGGTGGTACAAGAAACCCAAGAGGCTTCCTAGAGGTGACATATTAGGAGCAACTGAGTTGAAAGGTCCGGTTACCTACAGGTATAAAGATTTGAAGTCTGCAACCAAAAATTTTAGTACAGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATACAAGGGCACTCTGAAAAATGGCAAAGTAGTTGCAGTCAAGAAATTAATGTTAGGCCAAGCCGGCAAGTTGGATGAACAATTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATAGAAATCTAGTTCGACTTCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATTCTTGTTTATGAATACATGCCAAACAGTAGCCTTGACAAATTCTTGTTTGGTGAAAATAAAGGTTCTCTCAACTGGAAACAACGGTATGATATAATTTTAGGCACAGCAAGAGGTCTTGCATATCTTCATGAGGATTTCCATGTCTGCATCATACATAGAGACATAAAGCCTAGCAATATTCTCTTGGATGATGATTTTAAGCCTAGAATTGCTGATTTTGGGTTGGCAAGGCTTCTACCAGGTGACCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATACACATCACCTGAGTATGCAATCCATGGTCAGTTATCAGAGAAGGCTGATACCTACAGCTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGTGCAGTGAAGTGAGGGCTGATGTTGATGGTGAATTCCTCCTTAAAAGGGCATGGAGACTGTATGAGGGAGATATGCATTTGGAATTGGTTGACAAGACATTGAGCCCTGATGATTATGCTGAAGAAGTTAAGAAAATTATAGAGATTGCTTTATTGTGCACTCAAGCATCAGCTGCTGCAAGGCCAACAATGTCTGAAGTAGTAGTCCTACTCAAAAGCAAGAACTTACAGCAGAATATGAAGCCTACCATGCCTGTCTTTGTTGAATCTAACTATAGATCCCGGACAGACACTTCTACCTCAACTGGTGGTTCCTCTACATCTAATGCTACTGTTTCCACTTCTATACTATCAGCTCGATGA 1938 0.4267 MLQLKLIALTLFMLWSWRSFHGALGDPQTRLLNKGCSQYNATNLSNFNQNLNASLADLKAQVTNQRKHFATTQQARGTDPVYALFQCRNYLSNTDCAACFAVAAAQIRNCSAGANGARVIYDGCFLRYESNGFFDQTTLPGNSMVCGNQTATGATAFSATAQQVLMDLQIATPRIKGFFAATKTQVAGGDAIYAIAQCAETATESGCLDCLSVGYNNIQSCLPNTNGRAFDAGCFMRYSETSFFADNQTIDITPFLNQGGSSKKGAIIGGVVGGVALVVILLALFAWFRWYKKPKRLPRGDILGATELKGPVTYRYKDLKSATKNFSTENKLGEGGFGDVYKGTLKNGKVVAVKKLMLGQAGKLDEQFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMPNSSLDKFLFGENKGSLNWKQRYDIILGTARGLAYLHEDFHVCIIHRDIKPSNILLDDDFKPRIADFGLARLLPGDQSHLSTRFAGTLGYTSPEYAIHGQLSEKADTYSFGVVVLEIISGQKCSEVRADVDGEFLLKRAWRLYEGDMHLELVDKTLSPDDYAEEVKKIIEIALLCTQASAAARPTMSEVVVLLKSKNLQQNMKPTMPVFVESNYRSRTDTSTSTGGSSTSNATVSTSILSAR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03384 645 Gene3D Transferase(Phosphotransferase) domain 1 403 616 - -
Rops11g03384 645 MobiDBLite consensus disorder prediction 616 645 - -
Rops11g03384 645 Coils Coil 48 68 - -
Rops11g03384 645 ProSiteProfiles Protein kinase domain profile. 326 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03384 645 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Rops11g03384 645 Gene3D - 28 133 IPR038408 -
Rops11g03384 645 Gene3D - 142 243 IPR038408 -
Rops11g03384 645 CDD STKc_IRAK 332 597 - -
Rops11g03384 645 Gene3D Phosphorylase Kinase; domain 1 302 402 - -
Rops11g03384 645 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 632 - -
Rops11g03384 645 Pfam Protein kinase domain 327 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03384 645 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Rops11g03384 645 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Rops11g03384 645 FunFam Cysteine-rich receptor-like protein kinase 2 28 133 - -
Rops11g03384 645 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03384 645 FunFam Cysteine-rich receptor-like protein kinase 2 292 402 - -
Rops11g03384 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Rops11g03384 645 SUPERFAMILY Protein kinase-like (PK-like) 310 621 IPR011009 -
Rops11g03384 645 FunFam Cysteine-rich receptor-like protein kinase 2 141 243 - -
Rops11g03384 645 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Rops11g03384 645 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Rops11g03384 645 FunFam Cysteine-rich receptor-like protein kinase 2 403 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03384 Rops-Chr11 64983461 64987571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03384 1 645 Receptor kinase-like Gene Family AT1G70520 35.933 4.15e-125 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops11g03384 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03384 - - gmx:100813585 1021.15