Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03378 ATGATTGTGGTGGAGGGTATGTGTATATACAATCTCCTCCTGGAGTATGCTCCTTATGGTACTCTTGTTGACATGATCAAGAAAAAGTCTTTCTTGGAGAACAAGTCAACAAAAGCCTACATGAGCATGCTTCTTAGAGGCCTTTCTTCCGTTCATCAAAAGGGGATTGTTCATTGTGATTTCAAACCCGAAAACATCCTTGTGTTTCCACCACCTCGATATGGAGATAGTAGATATTATCAACTGAAGATTGTTGACTTTGGATTGGCTAGGACTCCTGAAGAGAAAGTTGACCAAGAATATTGGACGTTCAAGTTTAGAGGGGCTATTATATGTCACTAG 342 0.4006 MIVVEGMCIYNLLLEYAPYGTLVDMIKKKSFLENKSTKAYMSMLLRGLSSVHQKGIVHCDFKPENILVFPPPRYGDSRYYQLKIVDFGLARTPEEKVDQEYWTFKFRGAIICH* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03378 113 Gene3D Transferase(Phosphotransferase) domain 1 3 109 - -
Rops11g03378 113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Rops11g03378 113 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03378 113 SUPERFAMILY Protein kinase-like (PK-like) 9 96 IPR011009 -
Rops11g03378 113 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 98 - -
Rops11g03378 113 Pfam Protein kinase domain 11 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03378 Rops-Chr11 64917224 64917565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03378 6 91 MAP Kinase Kinase Kinase AT2G32510 41.379 7.74e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops11g03378 Pkinase 2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03378 - - gmx:102667952 112.849