Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03377 ATGGTTAAGTGGTTGAAGTTGAGAGTCCTTGGGAGTGGAAGCTATGGCACCGTTTACCAAGCTATTCCTGCTACACCAGAAAGAGATTATCCCAAGCCAATAGCTATAAAGAGTGCAATCCTTTGCGAGTCACACTCATTGCAGAAAGAAGAGCACATTTTAAATTACTCTATCCCGTTTGTTCCAGAAATCATCCAATCCCATGGCTATGAAATGACTGTGGAGGAGGGTGTGTGTGTCTATAATCTCCTCTTGGAGTATGCCCCATATGGTACTCTTGCCGACATGATCAAGAAAGAGCCTTTCTTAGAGAACAAGGCAACAAAAGCTTACATAAGCATGCTTCTTAGAGGCCTTTCTTCCATTCATCAAAAGGGGATTGTTCATTGTGATTTCAAACCTGAAAATATCCTTGTGTTTCCACCACCTCGATATGGAGATAGTAGATATTATCAACTGAAAATTGCTGACTTTGGATTGGCTAGGACTCCTGAAGAGAAAGTTGACCAAGAACATTGGACGTTCAAGTTTAGAGGGACTCCTAATTATATGTCACCAGAGTCACTTGCCCTTGGCCAAATTGAAACACCTTTGGACATATGGTCTTTTGGGTGTGTGGTTTTGGAGATGATCACTGGGCACCCTGCATGGAGGATGCAGATGCAAACACCAAAGGATATATTGATTGATGTTGGGGTCAAGCAACAAGCACCAGATATACCAAATGGACTCAGTGGTTCATTCATTGACTTCTTAAACAAGTGCTTCATGAGGGATCCAAGGGAAAGATGGACTGCTAACATGCTTCTCGATCATCGTTTTCTTCATTTTGATTGTAGATTATTGTGA 849 0.4181 MVKWLKLRVLGSGSYGTVYQAIPATPERDYPKPIAIKSAILCESHSLQKEEHILNYSIPFVPEIIQSHGYEMTVEEGVCVYNLLLEYAPYGTLADMIKKEPFLENKATKAYISMLLRGLSSIHQKGIVHCDFKPENILVFPPPRYGDSRYYQLKIADFGLARTPEEKVDQEHWTFKFRGTPNYMSPESLALGQIETPLDIWSFGCVVLEMITGHPAWRMQMQTPKDILIDVGVKQQAPDIPNGLSGSFIDFLNKCFMRDPRERWTANMLLDHRFLHFDCRLL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03377 282 Gene3D Transferase(Phosphotransferase) domain 1 2 280 - -
Rops11g03377 282 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 275 - -
Rops11g03377 282 ProSiteProfiles Protein kinase domain profile. 4 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03377 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Rops11g03377 282 Pfam Protein kinase domain 6 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03377 282 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Rops11g03377 282 SUPERFAMILY Protein kinase-like (PK-like) 4 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03377 Rops-Chr11 64902783 64903631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03377 2 278 MAP Kinase Kinase Kinase AT3G50310 38.571 1.67e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops11g03377 Pkinase 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03377 - - gmx:102667952 268.085