Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03372 ATGTCAAACCGAATTTGCATGAAAAAGGGGTTACTGACACTAATGGGTAGCCACATTGTGAAGTTTCTAACCAAAAACAAACGACACCCACTTTGTGTTTCCATGTCCATTCGTTCAAAAACGACATCTTCCCAGTATGTAGCTTCAAGAGCTCGGGATCCCACGTTTGAGAAGCTCATGGAAAAGTACAAGAACCTTTTCAAAGTCATTGCCATTCAAGACCTTATCCTTGCAAACCCAAAGAACCCATCAGTCTCCGTTGATTTCCTCTCCAGACTCTCCCAGAAGCTTCACCTAAATCGTGGTGCCACTGCCTTCCTCCGCAAGCTTCCTCATGTATTCGAAATCTACTATGAGCCTTCAAAGTTGCAACCGTATTGCAGGTTAACTGATGCTGCTCTTGATGTTTCACGACAAGAAGCAGAAGCCATTGATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTTAGGATACTGTCCATGTCTGAATCCAAAATGGTGCCTCTTAGAGCTATTTTCAAGCTTTGGAGGGAGCTTGGTTTGCCTGATGATTTTGAAGACTCAGTTATATCTGCTAATTCTAGTGTTTTTCAGTTGTGTGATGCACATGAAGCGAATACTCATTTGTTGAAGCTGGTCGGTGATGTTCCCAGCAATGGTTTTAGAGCTGCCGTTGAGGATTGGAGGGTTGTTGAGTGTTGTAAGGAGGATTGCAGTGTTGATAGGATGAAAATGAGGTTCAGTTTCAAACATGGATATCCTCCAGGGATGAGGTTGAGCAAGAATTTCAAGGACAAGGTGAAGGAATGGCAGAGTTTGCCTTATGTGGGGCCTTATGAGGTGGTGGTGGGTGAAAAGAAGAAATCTAAGGCTGGAATGATGGCTATGGAAAAACGAGCAGTGTCGATTGTTCATGAGTTTCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCATTTTAGAAAATGGTTTGGGATTGATTTAAATATAAGGGATTTGTTTCTTGATCACCCAGGGATCTTCTATTTGTCAACTAAGGGGAAAAGGCACACTGTTTTCCTGAGGGAAGCTTATGAAAGGGGGTGTTTGATCCAACCAAATCCTGTCTATGATGCAAGGAGAAGGCTACTTGATCTTGTTCTTTTAGAACGCCGGGGTTTGCCTGCTGTTAATTCCAAGTTGCAGGATAGAAGCAGCAGCAATGAGGTTGATGGACAGGAGGATAACCAGCAAAAGACATGA 1254 0.4322 MSNRICMKKGLLTLMGSHIVKFLTKNKRHPLCVSMSIRSKTTSSQYVASRARDPTFEKLMEKYKNLFKVIAIQDLILANPKNPSVSVDFLSRLSQKLHLNRGATAFLRKLPHVFEIYYEPSKLQPYCRLTDAALDVSRQEAEAIDASLPVVVERLVRILSMSESKMVPLRAIFKLWRELGLPDDFEDSVISANSSVFQLCDAHEANTHLLKLVGDVPSNGFRAAVEDWRVVECCKEDCSVDRMKMRFSFKHGYPPGMRLSKNFKDKVKEWQSLPYVGPYEVVVGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISHFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIQPNPVYDARRRLLDLVLLERRGLPAVNSKLQDRSSSNEVDGQEDNQQKT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03372 417 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 35 410 IPR045040 GO:0003723
Rops11g03372 417 Pfam Plant organelle RNA recognition domain 52 388 IPR021099 GO:0003723
Rops11g03372 417 MobiDBLite consensus disorder prediction 396 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03372 Rops-Chr11 64837335 64838486 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03372 - - gmx:100808404 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03372 11 64837335 64838486 Rops11g03372 11 64837335 64838486 ECH
Rops11g03372 11 64837335 64838486 Rops6g01897 6 36847473 36849526 PCT