Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03353 ATGCAGCTCCAAATCCATTCCCAGTTTTTCATATCCATTGTGTTTCTTGGTTTTGTGGCGTTGTGTTTTCGTTTGTATAATGCCTTGGTGGAGAAACCAAATAGGCTTCGCTCTAAGCTAAGGAAGCAAAGTATCAGTGGTCCACCTCCAACTATACTGCTTGGAAATATCAGGGAGTTAAAGAAAACTCAGCATACCACTGCAAATTCTCCTTCTTCTAAATTCCCTGACTCTCACAACTGTGCTTCTGTTATTTTTCCTTTATTTGAGAAATGGAGGGAGCAGTATGGTCAAATGTTCATGTTTTCCCTTGGAAACATGCAAATTTTATGTGTGAACCAACCTGACATGGTGAGAGATATCACCACATGCACATCCTTGGACTTGGGGAAGCCTTCATATCAGCTTAAACAACTAGGACCCTTGCTTGGTCAGGGCATTTTAACCTCAAATGGGACTATATGGGCCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAGAAGGTTAAGGGAATGATGAGAATCATTAGTGAGTCTTCTATATCTCTGCTAAACATGTGGAGTAGTAGAATAGAGGCAGAAGGTGGAGTTGCAGATATAAAAATTGATGAGTACATGAGAAGTTTCTCTGGGGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTATTCCAAGGGGGAAGAAATTTTCTTGAAATTAAGAGCTCTCCAAGAGATCTTATCCTGGAAAAACCGGTTCAAAGAGGTCCCTGGCATGAGATACCTTCCAACAAAGGCCAATAGAGAAACATGGGCATTAGAAAAGGAGGTGAAAAGTTTGATACTCCAGGTGATGAAAGAAAGAAAGGAAACTAATTTTGGAAAGGACCTGCTGCAAGTGCTTCTTGAAGGTGCTGAGAAAAGTAATCTCACTAAAAAGGCCATGGACTGTTTTATTGTGGATAACTGCAAGAATATATACCTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTTATGTTGTTGGCCTCAAATCAAAATTGGCAAGATTGTGTTCGTGCTGAGGTACTAGAAATCTGCAACGGTAGAACCCCGGATTATGATATGCTTGGTAAGATGAAGCAGCTGACAATGGTTATTCATGAATCCTTGCGTCTTTATCCCCCTGTAACTGTGGTGTCAAGGGAAGCCTTCAAGGACATGAAATTTGGGAACATTGATGTCCCCAAGGGCCTTAACCTTTGGATGTTGGTTCTAAATTTGCATACAAATCCAGATATCTGGGGAGTTGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGCTGCCACACGTCTACATGCCCTTTGGGGTTGGCCCACGAGTGTGTCTTGGACAGAACTTGGCTATTGTTGAACTTAAGATGATGATAGCTCTCATCTTGTCTCAATTCACTTTCTCCCTCTCTCCTCAATACGTCCATTCACCTGCTATTAGGTTGCTCTTGGAGCCTGAGCATGGAGTCCATCTCTTAGTAAGAAAGCTGTGA 1545 0.4194 MQLQIHSQFFISIVFLGFVALCFRLYNALVEKPNRLRSKLRKQSISGPPPTILLGNIRELKKTQHTTANSPSSKFPDSHNCASVIFPLFEKWREQYGQMFMFSLGNMQILCVNQPDMVRDITTCTSLDLGKPSYQLKQLGPLLGQGILTSNGTIWAHQRKILAPELYMEKVKGMMRIISESSISLLNMWSSRIEAEGGVADIKIDEYMRSFSGDVISKACFGSNYSKGEEIFLKLRALQEILSWKNRFKEVPGMRYLPTKANRETWALEKEVKSLILQVMKERKETNFGKDLLQVLLEGAEKSNLTKKAMDCFIVDNCKNIYLAGYETTAVSATWCLMLLASNQNWQDCVRAEVLEICNGRTPDYDMLGKMKQLTMVIHESLRLYPPVTVVSREAFKDMKFGNIDVPKGLNLWMLVLNLHTNPDIWGVDAYKFNPERFANGTIGACKLPHVYMPFGVGPRVCLGQNLAIVELKMMIALILSQFTFSLSPQYVHSPAIRLLLEPEHGVHLLVRKL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03353 514 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Rops11g03353 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 33 506 - -
Rops11g03353 514 Pfam Cytochrome P450 88 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 Gene3D Cytochrome P450 33 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03353 514 SUPERFAMILY Cytochrome P450 81 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03353 Rops-Chr11 64648872 64651882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03353 117 511 Cytochrome P450 AT5G24900 45.455 3.25e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03353 K24544 - gmx:100785420 852.818