Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03352 ATGCAGCTCCAATTTGGTTCTCAGTTTTTCATATCCATCGTGTTTCTTGGTTTGATTGTGTTGTTCTTTGGTTTGTATACTTCCTTGGTGGAGAAGCCAAATAGGCTTCGCTCTAAGCTAAGGAAGCAAGGTATCAGTGGTCCACCTCCAACTATACATCTTGGAAACATGAGGGAGCTAAAGAAAGCTCAGCCTCCCAATGCAAATTCTCTTTCTTTTGAATTCCCTGACTCTCACAACTGTGCTTCAGCTATCTTTCCTTTATTTGAGAAATGGAGGGAGCAGTATGGTCAAATGTTCATGTTTTCCCTTGGAAACATGCAAATTTTGAGTGTGAACCAACCTGGCATAGTGAGAGATATCACCACATTCACATCCTTGGACTTGGGGAAGCCTTCATATCAGCTTAAACAACTAGGACCCTTGCTTGGTCGGGGCATTTTAACCTCAAATGGGACTATATGGGCCCACCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAGAAGGTTAAGAGAATGATGAGAATCATTAGTGAGTCTTCTATATCTCTGCTAAACTTGTGGAGTAGTAGAATAGAGGCAGAAGGTGGAGTTGCAGATATAAAAATTGATGAGTACATGAGAACTTTCTCTGGGGATGTTATTTCAAAAGCATGCTTTGGAAGCAATTATTCCAACGGGGGAGAAATTTTCTTGAAATTCAGAGCTCTCCAAGAGATTTTATCCTGGAAAAATCGGTTCAAAGAGGTCCCTGGCATGAGATACCTTCCAACGGCCAATAGAGAAACATGGGCATTAGAAAAGGAGGTGAAAAGTTTGATACTCCAGGTGATGAAGGAAAGAAAGGGAACTAATTTTGGAAAGGACCTGCTGCAAGTGCTTCTTGAAGGTGCTGAGAAAAGTAATCTCACTAAAAAGGCCATGGACTGTTTTATTGGGGATAACTGCAAGAATATATACCTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTTATGTTGTTGGCCTCAAATCAAAATTGGAAAGATCGTGTTCGTGCTGAGGTACTACAAATCTGCAAGGGTAGAATCCCGGATTATGATATGCTTGGTAAGATGAAGCAGGACATGAAGTTTGGGAATGTTGATGTCCCCAATGGCCTTAACCTTTTTTTAATGGTTCTAAATTTGCATAAAAGTTCAGATATCTGGGGAGCTGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGCTGCCACAAATGTGCCCTTTGGGGTTGGCCCACGAGTGTGTCTTGGACAGAACTTGA 1323 0.4187 MQLQFGSQFFISIVFLGLIVLFFGLYTSLVEKPNRLRSKLRKQGISGPPPTIHLGNMRELKKAQPPNANSLSFEFPDSHNCASAIFPLFEKWREQYGQMFMFSLGNMQILSVNQPGIVRDITTFTSLDLGKPSYQLKQLGPLLGRGILTSNGTIWAHQRKILAPELYMEKVKRMMRIISESSISLLNLWSSRIEAEGGVADIKIDEYMRTFSGDVISKACFGSNYSNGGEIFLKFRALQEILSWKNRFKEVPGMRYLPTANRETWALEKEVKSLILQVMKERKGTNFGKDLLQVLLEGAEKSNLTKKAMDCFIGDNCKNIYLAGYETTAVSATWCLMLLASNQNWKDRVRAEVLQICKGRIPDYDMLGKMKQDMKFGNVDVPNGLNLFLMVLNLHKSSDIWGADAYKFNPERFANGTIGACKLPQMCPLGLAHECVLDRT* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03352 440 Gene3D Cytochrome P450 33 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 PANTHER CYTOCHROME P450 FAMILY MEMBER 36 432 - -
Rops11g03352 440 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 Pfam Cytochrome P450 370 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 Pfam Cytochrome P450 85 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03352 440 SUPERFAMILY Cytochrome P450 42 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03352 Rops-Chr11 64634006 64636655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03352 13 371 Cytochrome P450 AT5G24910 41.223 1.50e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03352 K24544 - gmx:100785420 619.002