Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03327 ATGCTCAAAGGTACACAGTGTCAAACTAAGGTAGGAAGCATATCCATCCCAGCTGGGACTAAGCTTTATTTACCATTCATTCTTCTTCATTATGATAGAAGGTACTGGGATAATCCAGAAGAGTTCAATCCAGAGAGATTCTCTGAAGGAGTATCAAAAGCTTCCCATCATCAAGTTGCTTTCTATCCATTTGGTTGGGGTCCCAGAATCTGCCTTGGACAACACTTAGCCATCATAGAAGCAAAGATGACTCTTGCTATGATTCTTCAACATTTCTCATTCCAGCTTTCACCCTCTTATTCTCATGCACCCCATGAGCATGTTACTCTCAAGCCACAATATGGAGCTCCTATTATTATTCACTCAATCTAA 372 0.4059 MLKGTQCQTKVGSISIPAGTKLYLPFILLHYDRRYWDNPEEFNPERFSEGVSKASHHQVAFYPFGWGPRICLGQHLAIIEAKMTLAMILQHFSFQLSPSYSHAPHEHVTLKPQYGAPIIIHSI* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03327 123 PRINTS E-class P450 group I signature 71 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03327 123 PRINTS E-class P450 group I signature 61 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03327 123 PRINTS E-class P450 group I signature 25 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03327 123 SUPERFAMILY Cytochrome P450 8 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03327 123 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 116 - -
Rops11g03327 123 Pfam Cytochrome P450 6 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g03327 123 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 64 73 IPR017972 GO:0005506|GO:0016705
Rops11g03327 123 Gene3D Cytochrome P450 2 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03327 Rops-Chr11 63772584 63772955 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03327 8 123 Cytochrome P450 AT3G14610 53.846 2.83e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03327 - - lja:Lj0g3v0208029.1 217.238