Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03317 ATGGATGTTCAAGTGATAAATGTGGAAGAAGGAAGCGGTCATCAAGCTAAGGCAGATGATGGGGATGCAGAACCTAGTGATAGTGAAATTAATAATGCTGAAAACTCTGGATCTCATGTTGAGGATGGGATTTCTGAGCCATACGTGGGTATGGAATTTGATTCCAAAGATGTTGCTAAGACTTTCTATGATGAGTATGCTAGACGCACGGGTTTCAGCTCTAAAATTGGTACATGTAGTCGCTCTAAAGCAGACGGGTCACATATGTATCGGGAGTTTGTGTGTGGTAGGGAAGGTTTGAAAAAAAGGTTTAATGACAGTTGTGATGCAATGCTTAGGATTGAGCTAAAGGGTCAACGTAAATGGGTTGTAACAAAGTTTGTGAAGGAGCATAGTCATTCCCTGGTGAGTTCTAGTAAAGCACAAAATCTTCGGCCACGTAAGCATTTTTCCAGTGTTGGAAGGACAATGCCTGAAACTTATCAAGGTGTGGGGCTTGTTCCAAGTGGTGTCATGTATGTATCAATGGATGGGAATCGCATTTCTAATCAAAATACTCGTGGAATGTTGAATATTCATGCTGCCACGGCTGCTGAACCAAGCTCCCCAGTTAAAACTTCGTCATTGATGAATTGTATTGTCAGTGGGACTATTTATGATGACAGGAAAACTGCTGCTTCAACTTTGGATACAACTCCTCTTTTATGGCCTCGGCAAGATGAAATAACAAGGAGGTTTAATCTTAATGATGCTGGTGGTCCTATTCAATCAGTTGCCGATCTAAATTTGCCACGAATGGCACCAGTGTCTCTTCATCAAGATGAAGGTCCATCTGAAAACATGGTAGTTCTTCCTTGCCTGAAATCAATGACATGGGTAATGGAGAACAAAAACTCAAGTCCAGGGAATAGAGTAGCTGTTATCAATCTGAAGTTGCAAGATTATAGCAGGACTCTGTCAACTGAATCTGAGGTTAAGTTTCAGCTATCAAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCCTACATCAGTGAACAGCTCTCAACGCCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACCGAGACAACTTCTGGTGAGTCTGAAGTAAAGTTTCAGGTGTCCAGGGATACATTGGGTGCCATGCTACGATCAATGGCCTATATCCGTGAGCAACTATCTTCTGCTGGCGATGCACAGTCTGAACCTCTATTGAAAAAGCATAGGAAGTAA 1245 0.4177 MDVQVINVEEGSGHQAKADDGDAEPSDSEINNAENSGSHVEDGISEPYVGMEFDSKDVAKTFYDEYARRTGFSSKIGTCSRSKADGSHMYREFVCGREGLKKRFNDSCDAMLRIELKGQRKWVVTKFVKEHSHSLVSSSKAQNLRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNRISNQNTRGMLNIHAATAAEPSSPVKTSSLMNCIVSGTIYDDRKTAASTLDTTPLLWPRQDEITRRFNLNDAGGPIQSVADLNLPRMAPVSLHQDEGPSENMVVLPCLKSMTWVMENKNSSPGNRVAVINLKLQDYSRTLSTESEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSSAGDAQSEPLLKKHRK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03317 414 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 350 402 IPR037360 -
Rops11g03317 414 MobiDBLite consensus disorder prediction 1 42 - -
Rops11g03317 414 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03317 Rops-Chr11 63527532 63542464 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g03317 FAR1 2.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03317 - - gmx:100786516 352.443