Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03314 ATGGCTGAAATTGCGGTAAACCTGGTGTTGGGCAAGTTGATTCCATTACTAAGAACTGAAATGACACTCCTGAAAGGGGTGCACACCGAAGTTGAATTCATCCAATATCAACTAGGCCTAATAAGAGCTTACCTGAGGGATGCAGACGTGAAAGCAGATAAGGAAGATAACATGAGTGACGTAGTGAAAGAATGGGTGAAGCAAGTGAGGGAAATAGCACATCGCATAGAAGATGTAATTGATGAATACCTTCTCCAAGTTGCAGAGCGTCGCCAAAAGCGTGGCCTCGCTGGTGTTGTGGCGAAAATAGCTCACTTACTCAGAAGCATAGAGCCACGACATGGGATCACATCAGAGATTCGTGACATTAACAACATGATAACTAGCCTTGACAAAAGGAAAGACACTTTGGGGTTCATTCCAACGGTGGAATCAAGCACTTCTTCTGGTGCTAAGAGCTCCAGGCATGACCTTCGAAGGGCTGCACTATTCCTCGAGGATGTTAAGCTTGTGGGGATCAACGATACAACAAAGAAACTCAAAAGCTTGCTACTAGATCAAGTTACTGAACGCACTATCATCGCTGTGGTTGGCACAGGCGGACTTGGTAAAACTACAGTTACGAGGAAACTATATGAGAAGCAGAAAGAAAAAAGGTTCGATTGTAGCGCTTGGGTCCCTGTGTCTAGCGAGTTCAAGGAGAAGAAAATATTTCAGTTGATGTTGCAAAGCTTTTATAATCAAGAGGATGATGATGACGACTCTAAGGCTTTGTTAATTGAGCAGATGAACAAGGAAACTCTGATAAGAAAGGTGAGAGAATATTTACAAGAAAGGAGCTACATTATTGTGTTTGATGATGTTTGGGCAGAAGACTTCTGGTCGAGAGTGGAATTTGCATTACCAAAAAATGAGAAAAGAAGTAGGATACTCATCACAACAAGACACATGGGTGTTGCTCAATTTTGCACTAGTTATGCACGTGTTCACATCCACGAGTTGCAACCTTTGGGTGCAAGTGATGCCATGAAGCTTTTCCTTTTTAAGGCATTTCAGTTTCAGCCAGAAGAAGGGTGTCCCAAAGAACTGATGGAATTGTCAGAAGACATTGTGAAGAAGTGTGATGGAGTACCACTTGCAATTGTGGCCATTGCTAGCCTCCTTTCCACAAAAAACAAAAACTTCTCTGAATGGCAAAAAGTTCTTGATAGTCTTGGCTCACGACTTGCAAGTGATCCTCATCTTAAAAGCTACAACCAAGTCTTATCAGAAAGTTACCTTGATCTTCCTTCTCACCTCAAGCCATGTCTCTTGTACTTTGGCATTTTCCCTGATGACTACTCCATCAGTTGTGCAAAACTTATTCAGCTATGGATAGCAGAGGGATTGGTGAATGTGACAGAGAATGATAATCGTACTGATGAGGAAGTTGCAGAAGAATACTTAGACGAACTGATTCGTAGGAGTTTGGTTACAGTGTCCACAGAGTATCTTGATGGCACAGCAAAAAGTTGCAGGGTGCATGATTTGTTGCATGACTTTATCAAGGGAAAGTGTTCAGAGGTGGACTTTTGCCAAGTGATAAGAAGTGACAACTTCACATTCAATGTAACAACTAGACGCTTGTCAATCCAATTGCAACCTAGCAATGAAGATGCTGCTGCCCTTCAAAGAGTTATTGATGCAGATCATGGTCGAGTGCGGTTTTGTTTTGCTTTTAACTTGGAAGAAAGGCCAAGGTCTTTCGTGAAATCATTCTTCTCTAGCTTCAAGCTCTTGGTAGGATTGGATTTTGAAGATGCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTGTTGCATTTGAAGTATCTGAACTTGAAGAACACCAAAATCAAGACCCTTCCAAGGTTCATTGGCAAGCTTCAGAACCTGCAAACTCTAGATATAAAATACACTCAAGTGCATGAACTACCTACAGAGATCAACAAGCTCACCAAGCTTCGCCATCTTCTGGCATATTCCATCAACGTGGAAAGGGAATTCAGCTTAGGATCTATGCAAGGGGTGCTGGTCAAGGAAGGGATTGGGCATCTAAAGGCTCTGCAAACGCTATCAAGGGTTGATATGACTAATGGGGTGAGCCTAATCAAAGAAATGAAAAATTTGAAACAACTGAGGAGGTTAGACATTGTCAAGCTAAGAAGACATAATGGAAAACCATTATGTAGTGCAATAGAGGGCATGGTGCATCTTCAGTCTTTGAGCATTGCAGCATCAAATGAGAATGAAATTCTGGACCTTTATTCATTGGTTAATCCTCCTCTTTATCATCTCAAGCGCCTTTACTTGCATGGGCGTTTAGAAACTATGCCATCTTTTATTCCAAAACTCCATGTTTTGGTCAGGTTATGCTTGAGTTGGTCAGGGTTAATGGAAGATCCCTTACCATTTCTTAAAGACTTGCCAGAGTTGCTGGAGCTTGAGCTTTACAACGCATTCCAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAATTTGAAGGGTTTATGCTTAGAGAAGATGCAAGCCTTGAAGACCTTGAGAATAGACAGAGGAGCATTGCCTCGTCTACAAAAGTTGACAATTGGGCCATGCCCTCAAATGGTGGAGGTTCCAAATGACATCCAAAACCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACCCAATGGAAGAAAAGGGCCATGACATGCTAAAGAACATTCCATTTGTCATTTACTCCAAGGGAAACAAGTTCTACACTCTTCACAATGATGCAGGGAATGAAACTGATGACTTTTAG 2823 0.4191 MAEIAVNLVLGKLIPLLRTEMTLLKGVHTEVEFIQYQLGLIRAYLRDADVKADKEDNMSDVVKEWVKQVREIAHRIEDVIDEYLLQVAERRQKRGLAGVVAKIAHLLRSIEPRHGITSEIRDINNMITSLDKRKDTLGFIPTVESSTSSGAKSSRHDLRRAALFLEDVKLVGINDTTKKLKSLLLDQVTERTIIAVVGTGGLGKTTVTRKLYEKQKEKRFDCSAWVPVSSEFKEKKIFQLMLQSFYNQEDDDDDSKALLIEQMNKETLIRKVREYLQERSYIIVFDDVWAEDFWSRVEFALPKNEKRSRILITTRHMGVAQFCTSYARVHIHELQPLGASDAMKLFLFKAFQFQPEEGCPKELMELSEDIVKKCDGVPLAIVAIASLLSTKNKNFSEWQKVLDSLGSRLASDPHLKSYNQVLSESYLDLPSHLKPCLLYFGIFPDDYSISCAKLIQLWIAEGLVNVTENDNRTDEEVAEEYLDELIRRSLVTVSTEYLDGTAKSCRVHDLLHDFIKGKCSEVDFCQVIRSDNFTFNVTTRRLSIQLQPSNEDAAALQRVIDADHGRVRFCFAFNLEERPRSFVKSFFSSFKLLVGLDFEDAPLDHLPDAVGYLLHLKYLNLKNTKIKTLPRFIGKLQNLQTLDIKYTQVHELPTEINKLTKLRHLLAYSINVEREFSLGSMQGVLVKEGIGHLKALQTLSRVDMTNGVSLIKEMKNLKQLRRLDIVKLRRHNGKPLCSAIEGMVHLQSLSIAASNENEILDLYSLVNPPLYHLKRLYLHGRLETMPSFIPKLHVLVRLCLSWSGLMEDPLPFLKDLPELLELELYNAFQGVELYIGKGWFKNLKGLCLEKMQALKTLRIDRGALPRLQKLTIGPCPQMVEVPNDIQNLQALQHLRFYEMPMNPMEEKGHDMLKNIPFVIYSKGNKFYTLHNDAGNETDDF* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03314 940 Gene3D - 4 117 - -
Rops11g03314 940 Gene3D - 337 424 IPR042197 -
Rops11g03314 940 Gene3D - 425 519 IPR036388 -
Rops11g03314 940 Gene3D - 152 331 IPR027417 -
Rops11g03314 940 FunFam Probable disease resistance protein At1g63360 426 516 - -
Rops11g03314 940 Pfam NB-ARC domain 176 423 IPR002182 GO:0043531
Rops11g03314 940 Gene3D Ribonuclease Inhibitor 564 925 IPR032675 -
Rops11g03314 940 Pfam Rx N-terminal domain 5 93 IPR041118 -
Rops11g03314 940 PANTHER DISEASE RESISTANCE PROTEIN RP 63 848 IPR044974 GO:0006952
Rops11g03314 940 FunFam Probable disease resistance protein At1g61300 153 327 - -
Rops11g03314 940 SUPERFAMILY L domain-like 506 906 - -
Rops11g03314 940 PRINTS Disease resistance protein signature 275 289 - -
Rops11g03314 940 PRINTS Disease resistance protein signature 634 650 - -
Rops11g03314 940 PRINTS Disease resistance protein signature 193 208 - -
Rops11g03314 940 PRINTS Disease resistance protein signature 374 388 - -
Rops11g03314 940 CDD RX-CC_like 2 130 IPR038005 -
Rops11g03314 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03314 Rops-Chr11 63464194 63472765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03314 171 381 WRKY Transcription Factor Family AT5G45050 23.502 1.73e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03314 K13457 - qsu:112004707 724.546