Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03306 ATGGTGGAACGGATTCCAACTCCTAAGCCACCAGTCAACAAAACCATGATACAGAAACTCCTCAAGGACGCTTCTGAATCTTCTCAGTTGCAGATCCAATGCCTCCAAAGACTCAAATCTATCGCTTCTGAGAGTGAGACAAATAGACGCTGCATGGAAGCTTCTGGTGTTGTTGAGTTCTTAGCATCAGTTGTAACCAACAACACCAAAGCTTCACTTTCCGCAGATGATGATGATGATATTGATGGGTTTGACTTGAAAATAGGGACCAAAGTGACGGTTTTCCAGCCCCTGGTGACGTGGCAAGCTTGTGGGGACTGTTTTGTGACAACTCAGCCATCCATGTGGCACTTAACGTGCCACATGGGCTTCTTAAACGGCGTCACTAACAGACCATTGACGGAGGGACTAAAGTGA 417 0.4652 MVERIPTPKPPVNKTMIQKLLKDASESSQLQIQCLQRLKSIASESETNRRCMEASGVVEFLASVVTNNTKASLSADDDDDIDGFDLKIGTKVTVFQPLVTWQACGDCFVTTQPSMWHLTCHMGFLNGVTNRPLTEGLK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03306 138 PANTHER WDSAM1 PROTEIN 2 75 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03306 Rops-Chr11 63224525 63225020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03306 2 70 U-box Gene Family AT2G35930 53.623 1.37e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03306 - - aip:107624094 104.76