Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03302 ATGGTGAACCACCCGGGCCAGATTGGAAATGAATATGCACATGTGCTTGATTGTCACATTTCCCACATTGCTGTCAAGTTTGCTGGGCTTGCGACCAAGATTGATAGGCATTCTGGTAAGGAGCCCAAGTTTTTGAAGAACGGTTATGCAGGTTTGGTTAAGATGATTCCAACCAAGCCTATGGTTGTTGAGACTCTCTCTACACACCTTCCACTTGGTCGTTTTGCTGTTAGGGGCATGCGTCAAACCGTGGCCGTTGGAGTCATCAAGAGTGTGGAGAAGAAAGACCCCGCATCTTGTTCCAAAAGTTTGTCGGAAAGATGCCATGAGTTGCATGCATGCATGATAACACAGTGA 357 0.4678 MVNHPGQIGNEYAHVLDCHISHIAVKFAGLATKIDRHSGKEPKFLKNGYAGLVKMIPTKPMVVETLSTHLPLGRFAVRGMRQTVAVGVIKSVEKKDPASCSKSLSERCHELHACMITQ* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03302 118 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 2 92 IPR009001 -
Rops11g03302 118 Pfam Elongation factor Tu C-terminal domain 5 92 IPR004160 -
Rops11g03302 118 Gene3D Translation factors 1 93 - -
Rops11g03302 118 FunFam Elongation factor 1-alpha 1 93 - -
Rops11g03302 118 PANTHER ELONGATION FACTOR 1 ALPHA 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03302 Rops-Chr11 63134922 63135278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03302 1 100 Eukaryotic Initiation Factors Gene Family AT1G07930 75.000 6.73e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03302 K03231 - dzi:111297638 159.844