Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03295 ATGGCAAGCCAGCAAATGATCAATTTTGCTTCTTCTGCTTCTTCTTCTTCGGTGTCTCCTAAAAGATATGATGTTTTTCTTAGCTTTCGTGGTGAGGATACTCGCAAGAGCTTCCTAAGCCATCTTCATGAAGCTTTGATCCAAAAGAAGGTTGAAACCTACATAGACTACCGGCTTCAAAAGGGAGGTGAGATCTCAGAAGCACTCATCAAAGCCATAGAAGAGTCACATGTGTCTGTTGTCATCTTCTCACAAAACTATGCTACTTCTAAGTGGTGCTTGGATGAAATCACTAAGATTACAGAATGCAAGAAGAAACAGGGACAAGATGTTATACCTGTGTTCTACGAAGTAGATCCATCACATGTAAGGAATCAGAGAGGGAGCTATGAGGAAGCGTTTGCAAAACATGAGCAAGATTTGAAGATCAGTCATGACAGGGTCCAAAATTGGAGAGGTGCTCTCAAAGAAGCAGCCAATTTGGCTGGATGGGATTCTCGGACTTATGGGACTGAATCTGGCTTCATTAAGGACATTGTCAAAGACGTTTTACAAAAACTGAATCTCATATACCCAATTGAATTCAAGGGGCTGGTTGGAATCGAGGAAAATTATGCAGGGGTTGAATCATTATTGGACATTGGATCAAGAGAAGTTCGAATGATTGGGATATGGGGCATGGGTGGCATAGGTAAGACCACCCTAGCAAGTGCTTTACATGCCAAGCTGTCTTCTCAATTTGAAGGGCATTGCTTTCTCCTAAGTGTAAGGGAAAAATTAAAAAAGTGTGGTCTAGATGTCTTGCGCAATAAGCTTTTTTCTGACTTGTTAGAGGAAGAAAATCTTCATGTTGATGTACCCAATGTTGTACCCCATTTTGTGACGAGTAGGCTTCGACGTAAAAGAGTTTTTATTGTTTTGGATGATGTGGCTGACTCAGAACAGTTAGAAGATCTAATCGGTGATTATGATTGTTTGGGACCAGGAAGTAGGGTGATTGTAACTACAAGAGATAAGCACATATTTAGCCTCGTTGATGGAGTTTATGAGATCAAGGAATTGAATTACCATCACTCTCTTCAGCTTTTCTGTTGGAATGCCTTCCGAGTAAAACATCCTAAAACTGGATATGAAGAGCTATCAAAAAATGTAATTGCCTATTGCAAAGGCAATCCTTTGGCTTTGAAAGTTTTGGGTGCACGTTTTCGTTCGAGAAGTATAGAAATATGGAAATGTGAATTGAGAAAGCTCCAAAAGATCCCTAATGTGAAAATTCATAATGTGCTAAAACTGAGTTTTGATGACTTGGATTGTACTGAGCAGGACATATTTCTTGACATTGCATGCTTCCTCAAAGGAGAATATAAAGATCACGTAACAAGTTTATTGGAAGCTTGTGGTTTCTTTGCAACCTCTGGGATAGAAGTCCTTTTAGATAAGTCGCTTATAACCCTATCAAATAAGTATACAATAGAAATGCATGACTTGATACAAGAAATGGGTTGGAATATTGTTCGTCAAGAATCTATGAAAGACCCTGGAAGACGAAGTCGAGTGTGGGATCCTGAGGAAGTGCATGATGTATTGAAATATGATAAGGGAACTGAAGCTATTGAAGGCATAATTTTAGATGTGTCTAAAATTAATGATCTACACTTGAGCTTTAGTTGCTTTAAAAAAATGAGTAACATAAGATTTCTTAAATTTTATTATGGGAAGTTGAGTGATAGATGTAATATATACCTTCCTAATGGACTTGAGTCGTTGTCTGATAAATTGAGGTACCTTCAATGGCATGGATTCTCTCAGGAGTCTTTGCCATCAACCTTCAGTCCTAAATTGCTTGTTGAGCTTTCCATGCCATTTAGCAACCTTGAAAAGCTTTGGGACGGAGTCCAGAATCTGGTGAATTTGAAGGAAATTGACCTTAGATTCTCCCAACACTTGGTTGAGGTCCCAGACTTATCTATGGCAACAAATCTTGAAGTATTATCTCTTACTGATTGTAAAAGTCTGCGTCATGTTCATCCATCTATTTTGTCTCTCCAGAAGCTTCGGGATCTTGATTTAGCAGAATGCAAAGAGATTGAAAGCCTTCAAACTGATGTTCATTTAAAATCACTCCATGACCTCCGTCTAAGCAATTGCTCATCCCTAAAGGAATTTTCAGTGTCCTCAGAGCAACTGGAGACATTGTGGTTAGATGGTACAGGTGTCCAAGAATTGCCCTCATCAATTTGGTGTTGTGAGAAACTTAAGTTTATTAATCTACAAGGTTGTGACAATCTTGATGGTTTTGGGAACAAGTTATCTTTTGATCCTGGAATGGGATCTCTTTCTGGTCTGGTCCTTTCTGGCTGCAAACAACTCAATGCATCAAATCTATGTTTCATCCTTGATGGTATGCGGTCATTAACGAGTTTGGATTTAGAAAATTGTTGCAACTTGGAAGCACTTCCTGACACCATTGGCCTGCTATCATCATTACAACGCTTAAAACTAAGTGGAAGCAATGTTGAGAGCTTGCCTGCAAACTTGAAGAACCTTCCAATGTTGAAAGAGCTTAGATTAGACAATTGCAAGAAACTTGTGTCTCTGCCAGAGCTTCCACTGTCGCTACGACAGTTAAGTGCTGTTAACAGCTCATCTTTGGTGACAGACTTCACCCAGTTACACATATCCTATTCACTTATATATGCATTTGAACCACATCCTCAATCCGTTTTCCTCCCTGGATCCCAAGTTCCGGACAGGTTTTTCTTTTGTGATGAAGAGGCTTCCATAACTATACCACATCTTCCTCCATCTGGCTTATGCGGCTTTATTTTTTGCCTCATTCTTTCTCGGTCAACACCAAATGGAAAATACGCATATGTTCATTGTAATATGTACAAATATTCCAAAAGAATCGGGAGCAAAGGTGCCTTTCTGGGTAATCAGAATTTGATTTCGGATCATGTGTTTCTTTGGTATTTTGACATCACAAAAGGTATAGACGTTTATTTACATGCGGAAATTGTAGAAAATGGAGCGTGTGATCCTTGCAACATATCGTTTGAATTCTTTCTTGAAGAGGAGGATGGAGAATTGTCAATGAAGGGGATAAAGGGGTGTGGGGTTTACCCAATATATGCCTCTGAACATAGTTATTCCTCCAAACAAAAGGGATTGGAGTTGGAGTTTGAGGATAGTTCTAAAGATATTGTTGAGTTTGAACCCAACAGGTCTAAAGATATTGATGAGTTACAGTCCAGAGCAACTGGATTTAGAGTCGAAGATGACCAGACTATGAAATTGCAGCGAGTTATGCACCAAACGATTTCAACAGGTATGCAGAATGAAGAAGTGAACTTGAATGATAACTCTTCGTGTCACAGCTTCATTGTTTCAACAGCATCTGGTTGTGAGAGGAAACCACAAAGTTCCAAGGAAGAAGATTACTGTATAAGTTCAATACCTAAAAATCCAATTATGCCCTTTGACACTCCAAGTGCTTCCATCATCGATTCAAATCAGACTAACGAAGTGTTAGAAGAAAATGACTTGACTGACAATAAAGTCAACGAATGTTCTGAGCCAATCTTGTTTAAGAAATCTCATACTCTTGTGGAGATTGACGATTTGCATCTTGAACCAGATTGGGATCCAATTTCTGAGCTCGAGAGCATGTTATGTGATAGTTATAAGTTGGTTCCAATGTCCGTTCACTCAACAATTGTTTTTGAGAGTGAAGTCCAGAATCCAAATATGACAGCTATCCTTGAAAAGTTAGAGACTCTTTTGGAGACCTCATCCCTTCAAATCATCTCTTCAGACGATGAAGTCAAGCAACAATTCCATCATGTTTTGGAACAACTTGGCCAATTTGAAGACCAAGTCCCTGTCAGGCTTCATCCTATAATTCACAAGTTAAAAGCTTTCATTGAAGGTGTTGACAACAGATTTGCGACCGACCAAATAACTATCCAAAATTATGATCAACTGCTCCAGTCAAGGTCTCTTCTATCAAAGCAATTGAAAAGTGCCAAAGCACAACAAGACCAATTTAAGTCAAAAGTCTCTCAAGGTAAAATACAAATTGAAAAGATCAATTTTGAGATTGTCGAACTGGAACAAAAATTAAGGGTTTTGGTTGAGACTAGAGACGAGTTAAAGAAAGACTTGGACTATTGTGATGTTGAAGAAAGCAAGCTAAAGACTCGAGTTGCACTTTGGGTACCAGAGTGCAAGACTATCATCACAGATTTGATGAAGTCTGAGGCATCTTACAAGGTGGCTCTAACCAATAAGAAGAAAGCAGAAGATGAATGGGCTGATCTAAAGAAGAGCTTTATTGCCAATAAGATTTGA 4350 0.3894 MASQQMINFASSASSSSVSPKRYDVFLSFRGEDTRKSFLSHLHEALIQKKVETYIDYRLQKGGEISEALIKAIEESHVSVVIFSQNYATSKWCLDEITKITECKKKQGQDVIPVFYEVDPSHVRNQRGSYEEAFAKHEQDLKISHDRVQNWRGALKEAANLAGWDSRTYGTESGFIKDIVKDVLQKLNLIYPIEFKGLVGIEENYAGVESLLDIGSREVRMIGIWGMGGIGKTTLASALHAKLSSQFEGHCFLLSVREKLKKCGLDVLRNKLFSDLLEEENLHVDVPNVVPHFVTSRLRRKRVFIVLDDVADSEQLEDLIGDYDCLGPGSRVIVTTRDKHIFSLVDGVYEIKELNYHHSLQLFCWNAFRVKHPKTGYEELSKNVIAYCKGNPLALKVLGARFRSRSIEIWKCELRKLQKIPNVKIHNVLKLSFDDLDCTEQDIFLDIACFLKGEYKDHVTSLLEACGFFATSGIEVLLDKSLITLSNKYTIEMHDLIQEMGWNIVRQESMKDPGRRSRVWDPEEVHDVLKYDKGTEAIEGIILDVSKINDLHLSFSCFKKMSNIRFLKFYYGKLSDRCNIYLPNGLESLSDKLRYLQWHGFSQESLPSTFSPKLLVELSMPFSNLEKLWDGVQNLVNLKEIDLRFSQHLVEVPDLSMATNLEVLSLTDCKSLRHVHPSILSLQKLRDLDLAECKEIESLQTDVHLKSLHDLRLSNCSSLKEFSVSSEQLETLWLDGTGVQELPSSIWCCEKLKFINLQGCDNLDGFGNKLSFDPGMGSLSGLVLSGCKQLNASNLCFILDGMRSLTSLDLENCCNLEALPDTIGLLSSLQRLKLSGSNVESLPANLKNLPMLKELRLDNCKKLVSLPELPLSLRQLSAVNSSSLVTDFTQLHISYSLIYAFEPHPQSVFLPGSQVPDRFFFCDEEASITIPHLPPSGLCGFIFCLILSRSTPNGKYAYVHCNMYKYSKRIGSKGAFLGNQNLISDHVFLWYFDITKGIDVYLHAEIVENGACDPCNISFEFFLEEEDGELSMKGIKGCGVYPIYASEHSYSSKQKGLELEFEDSSKDIVEFEPNRSKDIDELQSRATGFRVEDDQTMKLQRVMHQTISTGMQNEEVNLNDNSSCHSFIVSTASGCERKPQSSKEEDYCISSIPKNPIMPFDTPSASIIDSNQTNEVLEENDLTDNKVNECSEPILFKKSHTLVEIDDLHLEPDWDPISELESMLCDSYKLVPMSVHSTIVFESEVQNPNMTAILEKLETLLETSSLQIISSDDEVKQQFHHVLEQLGQFEDQVPVRLHPIIHKLKAFIEGVDNRFATDQITIQNYDQLLQSRSLLSKQLKSAKAQQDQFKSKVSQGKIQIEKINFEIVELEQKLRVLVETRDELKKDLDYCDVEESKLKTRVALWVPECKTIITDLMKSEASYKVALTNKKKAEDEWADLKKSFIANKI* 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03295 1449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 870 IPR044974 GO:0006952
Rops11g03295 1449 SMART till_3 22 161 IPR000157 GO:0007165
Rops11g03295 1449 SUPERFAMILY L domain-like 493 882 - -
Rops11g03295 1449 Pfam TIR domain 23 200 IPR000157 GO:0007165
Rops11g03295 1449 Pfam Leucine Rich Repeat 615 633 IPR011713 -
Rops11g03295 1449 Coils Coil 1360 1387 - -
Rops11g03295 1449 Coils Coil 1325 1345 - -
Rops11g03295 1449 Pfam NB-ARC domain 211 420 IPR002182 GO:0043531
Rops11g03295 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 447 IPR027417 -
Rops11g03295 1449 Gene3D - 17 187 IPR035897 -
Rops11g03295 1449 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Rops11g03295 1449 PRINTS Disease resistance protein signature 680 696 - -
Rops11g03295 1449 PRINTS Disease resistance protein signature 297 311 - -
Rops11g03295 1449 PRINTS Disease resistance protein signature 221 236 - -
Rops11g03295 1449 PRINTS Disease resistance protein signature 388 402 - -
Rops11g03295 1449 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 164 IPR035897 -
Rops11g03295 1449 Gene3D - 188 350 IPR027417 -
Rops11g03295 1449 FunFam Disease resistance protein RPS4 535 727 - -
Rops11g03295 1449 Gene3D Ribonuclease Inhibitor 531 726 IPR032675 -
Rops11g03295 1449 Gene3D Ribonuclease Inhibitor 727 893 IPR032675 -
Rops11g03295 1449 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Rops11g03295 1449 Gene3D - 353 437 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03295 Rops-Chr11 62969875 62977346 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03295 19 855 WRKY Transcription Factor Family AT4G12020 32.981 1.46e-117 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03295 - - gsj:114410062 1941.01