Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03290 ATGTTAAGTGGAATATTGCCTTATTCTTCCTCAAGCAAAGTTCATGCTCATGCTCAAGAAATTGACCTTAGATTCTCCCAACACTTGGTTGAGGTCCCAGACTTATCTATGGCCACAAATCTTGAAGGATTATCTCTTACTCAGTGTAAAAGTTTGCGTCATGTTCATCCATCCATTTTGTCTCTCCACAAGCTTCGGCATCTGGATTTAGATTGCACAGATATTGAAAGCCTTCAAAGTGACATTCATTTAAAATCTCTCCGTTTCCTCCGTCTAAGCAACTGCTCATCCCTAAAGGAATTTTCGATGTCCTCGGATGAACTAGAGCAATTGTGGTTAGATGGTACAATTATCCAAGAATTTCCCTCATCATTATTGTATTGTGCGAAACTTAAGCTTATCAATCTACAAGATTGTGACAATCTTCATAGTTTTGGGAATGAATTATCATATAATCCTCTGTACCTGGGATCTCTTGATCATCTGGTCCTTGCTGGCTGCAAACTACTGAATGCATCAAATCTAAGTTGTATCCTTGATGGTCTACGGTCTTTAAGGTCGCTAATTTTGGAAAATTGTTGCAATTTAGAAGCACTCCCTGACAACATTGGCTTGCTATCATCATTACGATGCTTGAAGCTAAGTGGAAGCAATGTTGAGAGCTTGTCTGCAAACATCAAGAACCTTTTGATGCTGGAAGAACTTATGTTAAACAATTGTAGGAAACTCGTTTTTCTACCAGAACTTCCCCTGTCTTTTTTAATGTTTAGTGCCGTTAACTGCACATCTCTGGTGACAGACTTCACTCAATTGCACACGTCTTTTTTACTTAAACCTAGACTTGAAAAATCTGTTTTCCACCCTGGAGCTCAAGTTCCAGACTGGTTTAGCTTTCGTGCAGAAAAGGCTTCAATAACTATTCCTCATCTTCCCTTATCTAGCTTAAGCGGCTTTGTTTTTTACCTTATTCTTACACAGTCACCACAAAATTGCAAGTACAGCTCTGTTGCATGTCTTATCTACAAATATTACGAAAGTCCCTTTCAGAGTGATTTGGAATTTATTTCGGATCATGTGATTCTTTGGTATACTGACATCAAAAAAGATGAAGTGTGTGATCCTTACAACATATCATTTAATTTCTTTCTTCAACATGAGGATGGTGAATGGTCAATGAAAGGGATAAAAGGGTGTGGGGTCTACCCAATACATGCCTCAGAACAAAAAGGATTGGAGTTGGAGTTTGGGGGTAGTTCTAAAGATATTGTTGAGTTAGAACCTAACAGTTCTACAGATACTGATGAGTTACAGCCCAGAGCAATTGGATTTAGAGTTGAAGAATTGAATCATAACAATGAAGATGACCAAACTAAGAAATTGCAGGAAGTTGTGCGCGAAACAATTACAACAGGTATGCAGAATGAAAATATGGGCTTGAATGAAAACTCTTCGTGTCACAGCTTCATAGCACATAGTTGTCAGAGAAAATCACAAAGTTTCAAGGAAGTGGATTACTATGTAAGTTCAATACCAAAAAATCAAATTATCCCCTTTGACACTCCAAGTGCTTCTAACATTGTTTCGAATCAGACTAATGAAGTGTCAGAAGAAAAAGATTTGACCAACAATCAAGTCAACAAATATTCTAAGCCGTTCATGTTTGAGAAAGTTCAAACTCTTGCGGAGATTGACAATCCACATCTTGAACCGGATTGGGATCCAATTGCCGAGCTCGAGAGCTTGTTATGTGATAGTTATAAGTTGGTTCCAATGTCCATTCACTCAACAACCGTTTCAGAGACTAATGTCCAGGATCCAAATGTGGCAGCTATCCTTGAAAAGTTAGAGTCCCTTTTGGAGACCTCCCTTGAAATCATCTCTTCAGACGATAAAGTCAAGCAACAATTGCATCATGTTTTGGAACAATTTGGCCAATTTGAAGACCGAGTACCTATCAGGCTTCATCCTGTGATTCACAAGTTAAAAGCTTTCATTGAAGGTGTTGATGTTAGATTTGCAACTGACCAAATAACTATAAAAAATTATGATCAACTGCTCCAATCAAGGTCTCTTCTATCAAAGCAATTGGAAAGTGCCAAAGCCCGCCAAGACCAATTTAGGTCAAAAGTCTCTCAAGGTAAAATACAAATTCAAAAGATCAATTCTGAGATTGTCGAATTGGAACAAAAATTAAGTGTTTTGGTTGAGACTAGAGACAGGCTAAAGAGAGCCGTAGACTATTGTGATGTTGAAAATAACCAGCTAAAGACTCAAGTGGCACAATGGGTGCCAGAATGCAAGACTATCATCACAACTTTGAAGAAGTATGAGTCATCTTACAAAGTGGCCCTAACCAATAAGAAGAAAGCTGAAGATGAATGGGCTGATCTAAAGAAGGCCTTTTTAGCTAATAAGATTTGA 2421 0.3812 MLSGILPYSSSSKVHAHAQEIDLRFSQHLVEVPDLSMATNLEGLSLTQCKSLRHVHPSILSLHKLRHLDLDCTDIESLQSDIHLKSLRFLRLSNCSSLKEFSMSSDELEQLWLDGTIIQEFPSSLLYCAKLKLINLQDCDNLHSFGNELSYNPLYLGSLDHLVLAGCKLLNASNLSCILDGLRSLRSLILENCCNLEALPDNIGLLSSLRCLKLSGSNVESLSANIKNLLMLEELMLNNCRKLVFLPELPLSFLMFSAVNCTSLVTDFTQLHTSFLLKPRLEKSVFHPGAQVPDWFSFRAEKASITIPHLPLSSLSGFVFYLILTQSPQNCKYSSVACLIYKYYESPFQSDLEFISDHVILWYTDIKKDEVCDPYNISFNFFLQHEDGEWSMKGIKGCGVYPIHASEQKGLELEFGGSSKDIVELEPNSSTDTDELQPRAIGFRVEELNHNNEDDQTKKLQEVVRETITTGMQNENMGLNENSSCHSFIAHSCQRKSQSFKEVDYYVSSIPKNQIIPFDTPSASNIVSNQTNEVSEEKDLTNNQVNKYSKPFMFEKVQTLAEIDNPHLEPDWDPIAELESLLCDSYKLVPMSIHSTTVSETNVQDPNVAAILEKLESLLETSLEIISSDDKVKQQLHHVLEQFGQFEDRVPIRLHPVIHKLKAFIEGVDVRFATDQITIKNYDQLLQSRSLLSKQLESAKARQDQFRSKVSQGKIQIQKINSEIVELEQKLSVLVETRDRLKRAVDYCDVENNQLKTQVAQWVPECKTIITTLKKYESSYKVALTNKKKAEDEWADLKKAFLANKI* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03290 806 Coils Coil 682 702 - -
Rops11g03290 806 SUPERFAMILY L domain-like 19 253 - -
Rops11g03290 806 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 19 162 - -
Rops11g03290 806 Coils Coil 710 744 - -
Rops11g03290 806 Coils Coil 773 793 - -
Rops11g03290 806 Gene3D Ribonuclease Inhibitor 107 271 IPR032675 -
Rops11g03290 806 Gene3D Ribonuclease Inhibitor 2 106 IPR032675 -
Rops11g03290 806 ProSiteProfiles Leucine-rich repeat profile. 64 85 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03290 Rops-Chr11 62820707 62822140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03290 19 242 WRKY Transcription Factor Family AT4G12020 31.556 1.87e-18 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03290 - - gsj:114380057 913.679